RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 F5H5T6 163 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 GFRA2O00451 464 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 GNB5O14775 395 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 HOXC11O43248 304 aaPredicted RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 MSI1O43347 362 aaKnown RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 GREM1O60565 184 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 TBX18O95935 607 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 MIPP30301 263 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 SERPINB6P35237 376 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 ADRA1BP35368 520 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 ETFBP38117 255 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 ARL4AP40617 200 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 IFNAR2P48551 515 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 PGFP49763 221 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CDR1P51861 262 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 NAP1L1P55209 391 aaKnown RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 NR1H3Q13133 447 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 SEMA3BQ13214 749 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 SLC12A1Q13621 1099 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 MESDQ14696 234 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 PPP2R5EQ16537 467 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CDO1Q16878 200 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 C15orf59Q2T9L4 293 aaPredicted RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 ODF2Q5BJF6 829 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 STXBP5Q5T5C0 1151 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 MANEALQ5VSG8 457 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 ZNF783Q6ZMS7 281 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CHST9Q7L1S5 443 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 PEX26Q7Z412 305 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 NT5DC3Q86UY8 548 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 FAM131BQ86XD5 332 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 REXO1L1PQ8IX06 675 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 YAF2Q8IY57 180 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 KATNAL2Q8IYT4 538 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CPA6Q8N4T0 437 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 HJURPQ8NCD3 748 aaPredicted RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 EXD1Q8NHP7 514 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 ADAMTS19Q8TE59 1207 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 NDRG1Q92597 394 aaKnown RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 HES6Q96HZ4 224 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 SNRNP25Q9BV90 132 aaKnown RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 SLC2A11Q9BYW1 496 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CARD9Q9H257 536 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CATSPERBQ9H7T0 1116 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 ZWILCHQ9H900 591 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 LZTFL1Q9NQ48 299 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 SLC2A4RGQ9NR83 387 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 NOP53Q9NZM5 478 aaKnown RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CFAP97Q9P2B7 532 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 FZD10Q9ULW2 581 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 PYCARDQ9ULZ3 195 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 PCDHA3Q9Y5H8 950 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 CAPN6Q9Y6Q1 641 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 C2CD4DB7Z1M9 353 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 H3BRJ5 948 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 BUB1O43683 1085 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 PAGE1O75459 146 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 CLDN11O75508 207 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 PALMO75781 387 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 GJB6O95452 261 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 PENKP01210 267 aaPredicted RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 SRFP11831 508 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 PRLRP16471 622 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 ZFXP17010 805 aaPredicted RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 GJA1P17302 382 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 COMTP21964 271 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 MAPKAPK2P49137 400 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 RWDD2BP57060 319 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 PITX1P78337 314 aaPredicted RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 GAD2Q05329 585 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 ZP2Q05996 745 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 MPPE1Q53F39 396 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 FAM133BQ5BKY9 247 aaKnown RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 MS4A13Q5J8X5 152 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 MEI1Q5TIA1 1274 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 SCYL2Q6P3W7 929 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 VITQ6UXI7 678 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 C1orf229Q6ZS94 237 aaPredicted RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 CYP4V2Q6ZWL3 525 aaPredicted RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 SETD3Q86TU7 594 aaPredicted RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 CHSY1Q86X52 802 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 LRRC49Q8IUZ0 686 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 CCDC117Q8IWD4 279 aaPredicted RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 LZTR1Q8N653 840 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 ARFGAP1Q8N6T3 406 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 CCDC26Q8TAB7 109 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 MAIP1Q8WWC4 291 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 PPM1EQ8WY54 764 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 FAF2Q96CS3 445 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 TBC1D31Q96DN5 1066 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 ASB2Q96Q27 587 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 SLC22A12Q96S37 553 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 CYP2S1Q96SQ9 504 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 PRMT1Q99873 361 aaKnown RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 FAM83CQ9BQN1 747 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 TRMT61BQ9BVS5 477 aaKnown RBP6.93□□□□□ -1.3
UPF3B-205ENST00000636792 APOL5Q9BWW9 433 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 TRIM7Q9C029 511 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 SPHK2Q9NRA0 654 aa6.93□□□□□ -1.3
UPF3B-205ENST00000636792 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms