RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GJB2P29033 226 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 MAT2AP31153 395 aaKnown RBP18.84■□□□□ 0.61
CLN6-212ENST00000636020 CSKP41240 450 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 PPP1R26Q5T8A7 1209 aaPredicted RBP18.84■□□□□ 0.61
CLN6-212ENST00000636020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.84■□□□□ 0.61
CLN6-212ENST00000636020 BRAPQ7Z569 592 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 CLEC14AQ86T13 490 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 NELFCDQ8IXH7 590 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 C12orf56Q8IXR9 622 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 MAPK15Q8TD08 544 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 TAF4BQ92750 862 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 KLHDC7BQ96G42 594 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 SEMA3CQ99985 751 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 KDM4CQ9H3R0 1056 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 SEPT3Q9UH03 358 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 ATXN7L1Q9ULK2 861 aaPredicted RBP18.84■□□□□ 0.61
CLN6-212ENST00000636020 ENTPD2Q9Y5L3 495 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 CLIC4Q9Y696 253 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 KIF26BQ2KJY2 2108 aa18.83■□□□□ 0.61
CLN6-212ENST00000636020 EDDM13A0A1B0GTR0 161 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 PMS2P1A4D2B8 440 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 TBL1XO60907 577 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 ASS1P00966 412 aaKnown RBP18.83■□□□□ 0.6
CLN6-212ENST00000636020 CR2P20023 1033 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 TGM2P21980 687 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 DRD3P35462 400 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 DUSP3P51452 185 aaPredicted RBP18.83■□□□□ 0.6
CLN6-212ENST00000636020 RAB41Q5JT25 222 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 PIK3R6Q5UE93 754 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 STK40Q8N2I9 435 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 ZNF557Q8N988 423 aaPredicted RBP18.83■□□□□ 0.6
CLN6-212ENST00000636020 FIBINQ8TAL6 211 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 EXTL1Q92935 676 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 FAM131CQ96AQ9 280 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 ARHGAP9Q9BRR9 750 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 UBXN6Q9BZV1 441 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 CAAP1Q9H8G2 361 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 USP29Q9HBJ7 922 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 CA5BQ9Y2D0 317 aa18.83■□□□□ 0.6
CLN6-212ENST00000636020 COL27A1Q8IZC6 1860 aaPredicted RBP18.83■□□□□ 0.6
CLN6-212ENST00000636020 ITIH6Q6UXX5 1313 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 PRAMEF26H0Y7S4 382 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 EXOC3O60645 756 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 PIAS2O75928 621 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 ITGB2P05107 769 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 ALPPL2P10696 532 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 SFTPCP11686 197 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 MLLT3P42568 568 aaPredicted RBP18.82■□□□□ 0.6
CLN6-212ENST00000636020 TLE1Q04724 770 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 KCNMA1Q12791 1236 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 ZACNQ401N2 412 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 PM20D1Q6GTS8 502 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 RFWD3Q6PCD5 774 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 USP53Q70EK8 1073 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 BHLHA9Q7RTU4 235 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 ARL14Q8N4G2 192 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 IFI44Q8TCB0 444 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 IRX2Q9BZI1 471 aaPredicted RBP18.82■□□□□ 0.6
CLN6-212ENST00000636020 OLA1Q9NTK5 396 aaKnown RBP18.82■□□□□ 0.6
CLN6-212ENST00000636020 NLGN3Q9NZ94 848 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.82■□□□□ 0.6
CLN6-212ENST00000636020 SFMBT1Q9UHJ3 866 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 ERVW-1Q9UQF0 538 aa18.82■□□□□ 0.6
CLN6-212ENST00000636020 UBE4BO95155 1302 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 EIF5BO60841 1220 aaKnown RBP18.81■□□□□ 0.6
CLN6-212ENST00000636020 RTN2O75298 545 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 SRPRAP08240 638 aaKnown RBP18.81■□□□□ 0.6
CLN6-212ENST00000636020 MZF1P28698 734 aaPredicted RBP18.81■□□□□ 0.6
CLN6-212ENST00000636020 CTSOP43234 321 aaPredicted RBP18.81■□□□□ 0.6
CLN6-212ENST00000636020 INHBCP55103 352 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 SERINC3Q13530 473 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 FAM26FQ5R3K3 315 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 PIGZQ86VD9 579 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 TRIM69Q86WT6 500 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 NDRG1Q92597 394 aaKnown RBP18.81■□□□□ 0.6
CLN6-212ENST00000636020 PTPRN2Q92932 1015 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 SGF29Q96ES7 293 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 CYP3A43Q9HB55 503 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 EVA1BQ9NVM1 165 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 CGNQ9P2M7 1197 aaKnown RBP18.81■□□□□ 0.6
CLN6-212ENST00000636020 SLCO3A1Q9UIG8 710 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 NBASA2RRP1 2371 aa18.81■□□□□ 0.6
CLN6-212ENST00000636020 GOLGA6L7A0A1B0GV03 622 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 CLEC18AA5D8T8 446 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 PLRG1O43660 514 aaKnown RBP18.8■□□□□ 0.6
CLN6-212ENST00000636020 TNFSF15O95150 251 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 GJB6O95452 261 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 IL1BP01584 269 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 FAM87AP0C7U9 286 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 THEGLP0DJG4 465 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 METAP1P53582 386 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 DLG4P78352 724 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 POM121L1PQ3SYA9 428 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 CLEC18BQ6UXF7 455 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 MFN1Q8IWA4 741 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 TMEM145Q8NBT3 493 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 CLEC18CQ8NCF0 446 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 STIM2Q9P246 746 aa18.8■□□□□ 0.6
CLN6-212ENST00000636020 UTP20O75691 2785 aaKnown RBP18.8■□□□□ 0.6
CLN6-212ENST00000636020 CREBBPQ92793 2442 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms