RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 RPS6KL1Q9Y6S9 549 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 HDAC3O15379 428 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 RAD17O75943 681 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 ZNF23P17027 643 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 MGAT1P26572 445 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 PPARGP37231 505 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SCNN1BP51168 640 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 LAMTOR4Q0VGL1 99 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SFSWAPQ12872 951 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SLC10A2Q12908 348 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 DPYSQ14117 519 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 C6orf52Q5T4I8 152 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 RNF149Q8NC42 400 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 ARNTL2Q8WYA1 636 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 FAM167AQ96KS9 214 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 ACAD9Q9H845 621 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 EFCAB1Q9HAE3 211 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 MTMR10Q9NXD2 777 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 PSME4Q14997 1843 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 KDM4FA0A1W2PPD8 638 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 SLCO1B7G3V0H7 640 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 MATN2O00339 956 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 ACKR2O00590 384 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 ADCY6O43306 1168 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 TADA2AO75478 443 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 APOA4P06727 396 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 STAT5BP51692 787 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 PRKAA2P54646 552 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 EMP3P54852 163 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 SESN2P58004 480 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 OSTNP61366 133 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 OLFML1Q6UWY5 402 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 DPH6Q7L8W6 267 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 LILRA2Q8N149 483 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 FLAD1Q8NFF5 587 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 CEP70Q8NHQ1 597 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 MAPK15Q8TD08 544 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 LRRN4Q8WUT4 740 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 CERS2Q96G23 380 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 WNK4Q96J92 1243 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 PIWIL1Q96J94 861 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 PKP2Q99959 881 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 PRDM16Q9HAZ2 1276 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 MRPL40Q9NQ50 206 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 TSPAN16Q9UKR8 245 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 PCDHGB4Q9UN71 923 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF510Q9Y2H8 683 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 RAP2CQ9Y3L5 183 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 PCDHGB5Q9Y5G0 923 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 CRADDP78560 199 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 COG7P83436 770 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 SLC6A3Q01959 620 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 ART3Q13508 389 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 SEL1L3Q68CR1 1132 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 DCLK2Q8N568 766 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 TRIML2Q8N7C3 387 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 COLGALT1Q8NBJ5 622 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 TSPAN14Q8NG11 270 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 BIRC8Q96P09 236 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 RBBP8Q99708 897 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 WDR41Q9HAD4 459 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 VTI1BQ9UEU0 232 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 GTF2IRD1Q9UHL9 959 aa15.14■□□□□ 0.01
CACNA1A-220ENST00000635988 hCG_2014768A0A024R1R8 64 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 G3V2L1 256 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 H3BSA7 217 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 PIK3R2O00459 728 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 ITGB3P05106 788 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 PCSK6P29122 969 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 CDK9P50750 372 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 CDKL1Q00532 357 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 INCA1Q0VD86 236 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 CEACAM7Q14002 265 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 ZDHHC17Q8IUH5 632 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 GALNT4Q8N4A0 578 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 CCT7Q99832 543 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 DHX35Q9H5Z1 703 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF214Q9UL59 606 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 GOLGA8QA0A0J9YX86 632 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 GOLGA8OA6NCC3 632 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 GOLGA8NF8WBI6 632 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 COQ9O75208 318 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 TRPA1O75762 1119 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 DGKIO75912 1065 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 CXCL8P10145 99 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 PTPN9P43378 593 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 LIMK2P53671 638 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 TXNL4AP83876 142 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 LPIN1Q14693 890 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 NAPRTQ6XQN6 538 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 TNS4Q8IZW8 715 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 CNTD1Q8N815 330 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 TMEM102Q8N9M5 508 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 RDH11Q8TC12 318 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 RCN3Q96D15 328 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 PCYT2Q99447 389 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 OSBPL11Q9BXB4 747 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 OXCT2Q9BYC2 517 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 TBCCD1Q9NVR7 557 aa15.13■□□□□ 0.01
CACNA1A-220ENST00000635988 ZNF358Q9NW07 568 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms