RNA–Protein interactions for RNA: ENST00000635906.1

GSE1-215, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-215ENST00000635906 RAPGEF5Q92565 580 aa12.79□□□□□ -0.36
GSE1-215ENST00000635906 MAK16Q9BXY0 300 aaKnown RBP12.79□□□□□ -0.36
GSE1-215ENST00000635906 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
GSE1-215ENST00000635906 C8orf33Q9H7E9 229 aaPredicted RBP12.79□□□□□ -0.36
GSE1-215ENST00000635906 KIF9Q9HAQ2 790 aa12.79□□□□□ -0.36
GSE1-215ENST00000635906 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
GSE1-215ENST00000635906 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
GSE1-215ENST00000635906 SMG5Q9UPR3 1016 aaKnown RBP12.79□□□□□ -0.36
GSE1-215ENST00000635906 KMT2BQ9UMN6 2715 aaPredicted RBP12.79□□□□□ -0.36
GSE1-215ENST00000635906 TGM1P22735 817 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
GSE1-215ENST00000635906 HCAR3P49019 387 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 NR2C2P49116 596 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 CARSP49589 748 aaKnown RBP12.78□□□□□ -0.36
GSE1-215ENST00000635906 PSEN1P49768 467 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 HDAC4P56524 1084 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 CALCOCO2Q13137 446 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 PUM1Q14671 1186 aaKnown RBP eCLIP12.78□□□□□ -0.36
GSE1-215ENST00000635906 SLMAPQ14BN4 828 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 PPP1R7Q15435 360 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 RSPO4Q2I0M5 234 aaPredicted RBP12.78□□□□□ -0.36
GSE1-215ENST00000635906 CFAP58Q5T655 872 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 TXNDC8Q6A555 127 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 TRNP1Q6NT89 227 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 AADACL2Q6P093 401 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 TTC27Q6P3X3 843 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 DENND5BQ6ZUT9 1274 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 PCGF5Q86SE9 256 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 GOLGA6L1Q8N7Z2 621 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 MAB21L3Q8N8X9 362 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 ZMIZ2Q8NF64 920 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 FAM3CQ92520 227 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 RNF25Q96BH1 459 aaPredicted RBP12.78□□□□□ -0.36
GSE1-215ENST00000635906 LRRC3BQ96PB8 259 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 CHRDQ9H2X0 955 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 NDRG2Q9UN36 371 aaKnown RBP12.78□□□□□ -0.36
GSE1-215ENST00000635906 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 RAD54BQ9Y620 910 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 PIAS3Q9Y6X2 628 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 ZFHX4Q86UP3 3567 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 PTPRDP23468 1912 aa12.78□□□□□ -0.36
GSE1-215ENST00000635906 CLDN5O00501 218 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 PRAMEF12O95522 483 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 LTFP02788 710 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 PFKLP17858 780 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 ECHS1P30084 290 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 PPP3CCP48454 512 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 CDH6P55285 790 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 FAM193AP78312 1265 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 XRCC4Q13426 336 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 HLTFQ14527 1009 aaKnown RBP eCLIP12.77□□□□□ -0.37
GSE1-215ENST00000635906 KRT81Q14533 505 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 OASLQ15646 514 aaKnown RBP12.77□□□□□ -0.37
GSE1-215ENST00000635906 ARL13BQ3SXY8 428 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 SLC9A4Q6AI14 798 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 CYP4V2Q6ZWL3 525 aaPredicted RBP12.77□□□□□ -0.37
GSE1-215ENST00000635906 SND1Q7KZF4 910 aaKnown RBP eCLIP12.77□□□□□ -0.37
GSE1-215ENST00000635906 DEFB106AQ8N104 65 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 IFT81Q8WYA0 676 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.37
GSE1-215ENST00000635906 ART4Q93070 314 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 HAUS1Q96CS2 278 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 SNF8Q96H20 258 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 PIWIL1Q96J94 861 aaKnown RBP12.77□□□□□ -0.37
GSE1-215ENST00000635906 CFAP57Q96MR6 1250 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 RNF157Q96PX1 679 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 FMO2Q99518 471 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 TTLL2Q9BWV7 592 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 ZWILCHQ9H900 591 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 ABCC13Q9NSE7 274 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.77□□□□□ -0.375e-7■■■□□ 17.8
GSE1-215ENST00000635906 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 IL37Q9NZH6 218 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 NCDNQ9UBB6 729 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 NFU1Q9UMS0 254 aa12.77□□□□□ -0.37
GSE1-215ENST00000635906 TPRP12270 2363 aaKnown RBP12.77□□□□□ -0.37
GSE1-215ENST00000635906 OBSL1O75147 1896 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 DENND4CQ5VZ89 1909 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 ACACBO00763 2458 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 TRAV19A0A0A6YYK7 116 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 TCRBV7S2A1N4TA0A589 114 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 FAM92AA1XBS5 289 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 CAPN9O14815 690 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 DAPK3O43293 454 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 CST8O60676 142 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 BEST1O76090 585 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 SEC31AO94979 1220 aaKnown RBP12.76□□□□□ -0.37
GSE1-215ENST00000635906 RTN3O95197 1032 aaPredicted RBP12.76□□□□□ -0.37
GSE1-215ENST00000635906 USP17L7P0C7H9 530 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 MYBL2P10244 700 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 TCF4P15884 667 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 SULT1E1P49888 294 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
GSE1-215ENST00000635906 CBLBQ13191 982 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 DPYSL3Q14195 570 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 GAS6Q14393 721 aa12.76□□□□□ -0.37
GSE1-215ENST00000635906 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
GSE1-215ENST00000635906 ATP13A4Q4VNC1 1196 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms