RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 PRMT7Q9NVM4 692 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 SAE1Q9UBE0 346 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 AMHP03971 560 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 PABPC4LP0CB38 370 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 GRK2P25098 689 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 GEMP55040 296 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 MRPS22P82650 360 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 PLEKHH3Q7Z736 793 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 CENPLQ8N0S6 344 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 FBXO36Q8NEA4 188 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 SLC20A1Q8WUM9 679 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 OSCP1Q8WVF1 389 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 FRMD8P1Q9BZ68 369 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 DCLK3Q9C098 648 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 DEPDC5O75140 1603 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 FAM237BA0A1B0GVD1 139 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 TRPC5OSA6NMA1 111 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 CHURC1-FNTBB4DL54 471 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 KRT33AO76009 404 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 IL12AP29459 219 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 HALP42357 657 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 GSSP48637 474 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 CCNG2Q16589 344 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 NRF1Q16656 503 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 TCEAL5Q5H9L2 206 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 BROXQ5VW32 411 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 ABRAXAS1Q6UWZ7 409 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 PCSK9Q8NBP7 692 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 ASZ1Q8WWH4 475 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 TMEM39AQ9NV64 488 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 KANSL1LA0AUZ9 987 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 TMEM191CA6NGB0 347 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 ANXA9O76027 345 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 CDK9P50750 372 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 RHOAP61586 193 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 TSC22D1Q15714 1073 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 AMHR2Q16671 573 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 GALNT18Q6P9A2 607 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 PDSS2Q86YH6 399 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 CDK20Q8IZL9 346 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 MTERF3Q96E29 417 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 ZNF512BQ96KM6 892 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 TMEM117Q9H0C3 514 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 MYOZ2Q9NPC6 264 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 DPP3Q9NY33 737 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 MSRAQ9UJ68 235 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 PCDHGA3Q9Y5H0 932 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 TBX10O75333 385 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 RHOCP08134 193 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 ALOX12P18054 663 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 SLC1A6P48664 564 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 RPL10AP62906 217 aaKnown RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 ARMC4Q5T2S8 1044 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 CCSAPQ6IQ19 270 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 POC5Q8NA72 575 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 GSTCDQ8NEC7 633 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 RSPH9Q9H1X1 276 aaPredicted RBP10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 POLR1BQ9H9Y6 1135 aa10.04□□□□□ -0.8
SPTAN1-228ENST00000635853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 GNG14A0A1W2PPG7 69 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 MGAT4DA6NG13 374 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 TMEM114B3SHH9 223 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 CCNKO75909 580 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 STAU1O95793 577 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 IGKV5-2P06315 115 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 CNPP09543 421 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 CYP19A1P11511 503 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 MAPK10P53779 464 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 TRAF3Q13114 568 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 EFHD2Q96C19 240 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 FRMD8Q9BZ67 464 aaPredicted RBP10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 VWDEQ8N2E2 1590 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 SH3PXD2BA1X283 911 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 CAPN8A6NHC0 703 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 MTSS1O43312 755 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 PDE9AO76083 593 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 CLTBP09497 229 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 SUPT20HL2P0C7V6 817 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 MSH3P20585 1137 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 AMPD1P23109 780 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 FASP25445 335 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 CRABP2P29373 138 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 ZFP69Q49AA0 526 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 KLHL12Q53G59 568 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 C12orf60Q5U649 245 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 MIB1Q86YT6 1006 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 MCOLN3Q8TDD5 553 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 ATG4AQ8WYN0 398 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 ERLEC1Q96DZ1 483 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 HPDLQ96IR7 371 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 S100A13Q99584 98 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 THUMPD3Q9BV44 507 aaKnown RBP10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 SEMA6AQ9H2E6 1030 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 SNX8Q9Y5X2 465 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 SEMA3DO95025 777 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 TGDSO95455 350 aa10.03□□□□□ -0.8
SPTAN1-228ENST00000635853 ITGALP20701 1170 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms