RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 LOC102723971A0A1B0GUV8 181 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 CCDC151A5D8V7 595 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 CDHR4A6H8M9 788 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 YDJCA8MPS7 323 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 TISP43B9A030 160 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 E9PLN8 166 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 M0QYG6 137 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 CCP110O43303 1012 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 RASSF9O75901 435 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 NDST3O95803 873 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ITGA5P08648 1049 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 CYP2D6P10635 497 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 CKBP12277 381 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ACVR2AP27037 513 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 MAPK9P45984 424 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 LBX1P52954 281 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ITGA8P53708 1063 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 SOX10P56693 466 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 EIF4A1P60842 406 aaKnown RBP2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC29A2Q14542 456 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 POSTNQ15063 836 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 RABEP1Q15276 862 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 NPY5RQ15761 445 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 MAPKAPK3Q16644 382 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 PROSER3Q2NL68 480 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC10A5Q5PT55 438 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 RRAGBQ5VZM2 374 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 TANGO2Q6ICL3 276 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ZDHHC24Q6UX98 284 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 CYP26C1Q6V0L0 522 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 KIAA0408Q6ZU52 694 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 COLGALT2Q8IYK4 626 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 SLC17A8Q8NDX2 589 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 FAM46DQ8NEK8 389 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 MYCBPAPQ8TBZ2 947 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 TBC1D15Q8TC07 691 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 STT3BQ8TCJ2 826 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 NUP133Q8WUM0 1156 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ZNF622Q969S3 477 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ABHD8Q96I13 439 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 MOGAT1Q96PD6 335 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 HAPLN3Q96S86 360 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 VKORC1Q9BQB6 163 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 SENP7Q9BQF6 1050 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 MESP1Q9BRJ9 268 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 SORBS1Q9BX66 1292 aaKnown RBP2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 IMPG2Q9BZV3 1241 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 VPS33BQ9H267 617 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 NRIP3Q9NQ35 241 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ITM2CQ9NQX7 267 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 LRFN1Q9P244 771 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 IGSF9Q9P2J2 1179 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 PDP2Q9P2J9 529 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 DKK4Q9UBT3 224 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 MID2Q9UJV3 735 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 HDAC9Q9UKV0 1011 aa2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 NIP7Q9Y221 180 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMARCB1-208ENST00000634926 ABCC4O15439 1325 aa2.84□□□□□ -1.96
SMARCB1-208ENST00000634926 RTL9Q8NET4 1388 aa2.84□□□□□ -1.96
SMARCB1-208ENST00000634926 CHD7Q9P2D1 2997 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CUL9Q8IWT3 2517 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 A0A1B0GVC2 190 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 PRRT4C9JH25 899 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 NCAM2O15394 837 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 IRAK2O43187 625 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 KIF20AO95235 890 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 FCER1AP12319 257 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 EGR1P18146 543 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 DDIT3P35638 169 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 EPS15P42566 896 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CPT1AP50416 773 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 POLE2P56282 527 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 TBX2Q13207 712 aaPredicted RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 ARHGEF7Q14155 803 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 DCTN1Q14203 1278 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 IQCB1Q15051 598 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 PTPRRQ15256 657 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 INSCQ1MX18 579 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 TRIM71Q2Q1W2 868 aaKnown RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 SUSD4Q5VX71 490 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 JAKMIP3Q5VZ66 844 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 PLAG1Q6DJT9 500 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 FCRL6Q6DN72 434 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 KIAA1161Q6NSJ0 714 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 JMJD6Q6NYC1 403 aaPredicted RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 FOXR2Q6PJQ5 311 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 USP49Q70CQ1 688 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 USP50Q70EL3 339 aaPredicted RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 IRF2BP2Q7Z5L9 587 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CNTROBQ8N137 903 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CFAP52Q8N1V2 620 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CLASRPQ8N2M8 674 aaKnown RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 TOR1AIP2Q8NFQ8 470 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 SMCR8Q8TEV9 937 aaPredicted RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 IPO4Q8TEX9 1081 aaKnown RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 STYXQ8WUJ0 223 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 USP13Q92995 863 aaPredicted RBP2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 TMEM125Q96AQ2 219 aa2.83□□□□□ -1.96
SMARCB1-208ENST00000634926 CAPNS2Q96L46 248 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms