RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 RRN3Q9NYV6 651 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 COX16Q9P0S2 106 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ZFATQ9P243 1243 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ARMCX1Q9P291 453 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 IPPQ9Y573 584 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 TDRD15B5MCY1 1934 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 PTPRDP23468 1912 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PATJQ8NI35 1801 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 MIA3Q5JRA6 1907 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 SRCAPQ6ZRS2 3230 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 C9IYK1 514 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 F5H423 210 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 F8W8V4 182 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 HAS3O00219 553 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CLDN5O00501 218 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 GABRDO14764 452 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 KIF1CO43896 1103 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 KLHL2O95198 593 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PSMG1O95456 288 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 AP2A1O95782 977 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PROCP04070 461 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 KITP10721 976 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 FGF3P11487 239 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 ACADSP16219 412 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ADRA1BP35368 520 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 SOX11P35716 441 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 SLC1A6P48664 564 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CPT1AP50416 773 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 SERPINB8P50452 374 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CDK7P50613 346 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TKTL1P51854 596 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 GJA9P57773 515 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TPI1P60174 286 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 RPL10AP62906 217 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 FKBP1BP68106 108 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PITX1P78337 314 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 IRX4P78413 519 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 NME3Q13232 169 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 BLMHQ13867 455 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 RCN2Q14257 317 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 RCN1Q15293 331 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 MUM1Q2TAK8 710 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TRMT5Q32P41 509 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 CCDC153Q494R4 210 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 HSF5Q4G112 596 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 KHDC1Q4VXA5 237 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 ACSBG2Q5FVE4 666 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 MDH1BQ5I0G3 518 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TEDDM1Q5T9Z0 273 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 WSCD1Q658N2 575 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 ITPRIPL1Q6GPH6 555 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TWF2Q6IBS0 349 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 CLEC20AQ6ZU45 233 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PAQR9Q6ZVX9 377 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PID1Q7Z2X4 250 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 NET1Q7Z628 596 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 TLK2Q86UE8 772 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TREML1Q86YW5 311 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 UNC5BQ8IZJ1 945 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 TMEM86AQ8N2M4 240 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 SLC7A14Q8TBB6 771 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PIWIL2Q8TC59 973 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 TMEM40Q8WWA1 233 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 DNAJC9Q8WXX5 260 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 NDRG1Q92597 394 aaKnown RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 CERS2Q96G23 380 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 FAM161BQ96MY7 647 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CCDC106Q9BWC9 280 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CNGB3Q9NQW8 809 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 KRT82Q9NSB4 513 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 PIGVQ9NUD9 493 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 SLC38A7Q9NVC3 462 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 BFARQ9NZS9 450 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 KLHL8Q9P2G9 620 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 MARCOQ9UEW3 520 aaPredicted RBP8.27□□□□□ -1.09
GPC3-204ENST00000631057 TRHDEQ9UKU6 1024 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 EMCNQ9ULC0 261 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 RPS6KL1Q9Y6S9 549 aa8.27□□□□□ -1.09
GPC3-204ENST00000631057 CAPN9O14815 690 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 NVLO15381 856 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 KRT36O76013 467 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 GSRP00390 522 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 GNAT1P11488 350 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 MYL4P12829 197 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 AOC1P19801 751 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 ACAT1P24752 427 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 PTPN3P26045 913 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 TYK2P29597 1187 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SERPINB6P35237 376 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SPRP35270 261 aaPredicted RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 MAGEA12P43365 314 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 LHX1P48742 406 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 NDUFV1P49821 464 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 ALDH18A1P54886 795 aaKnown RBP8.26□□□□□ -1.09
GPC3-204ENST00000631057 MAP3K7CLP57077 242 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 DAOAP59103 153 aa8.26□□□□□ -1.09
GPC3-204ENST00000631057 SLC34A1Q06495 639 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms