RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 CDH23Q9H251 3354 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 PRRG1O14668 218 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 AXIN1O15169 862 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 PAGE1O75459 146 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 APOEP02649 317 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 AMHP03971 560 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 ITGB6P18564 788 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 ALDH7A1P49419 539 aaKnown RBP7.7□□□□□ -1.18
PKP4-217ENST00000628904 CDC42EP1Q00587 391 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 STX3Q13277 289 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 POM121L1PQ3SYA9 428 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 UBXN11Q5T124 520 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 LONP2Q86WA8 852 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 DCBLD1Q8N8Z6 715 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 NAT8LQ8N9F0 302 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 C12orf50Q8NA57 414 aaPredicted RBP7.7□□□□□ -1.18
PKP4-217ENST00000628904 CKAP2Q8WWK9 683 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 SGSM3Q96HU1 749 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 ELMO2Q96JJ3 720 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 THTPAQ9BU02 230 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 MORF4L1Q9UBU8 362 aa7.7□□□□□ -1.18
PKP4-217ENST00000628904 ALDH2P05091 517 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 GJA1P17302 382 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 IL4RP24394 825 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ELF1P32519 619 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 TTC39BQ5VTQ0 682 aaPredicted RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 FAM219BQ5XKK7 198 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 NCBP2-AS2Q69YL0 99 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 LINGO4Q6UY18 593 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 BZW1Q7L1Q6 419 aaKnown RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 TMEM110Q86TL2 294 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 UNC93AQ86WB7 457 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ECHDC2Q86YB7 292 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 TTC39CQ8N584 583 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 DQX1Q8TE96 717 aaKnown RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 TMEM120AQ9BXJ8 343 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 NDFIP2Q9NV92 336 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 GMIPQ9P107 970 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 DRG1Q9Y295 367 aaKnown RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 DNAJC16Q9Y2G8 782 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CDY1Q9Y6F8 540 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 XPO1O14980 1071 aaKnown RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 TP73O15350 636 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 SEPT4O43236 478 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ZFXP17010 805 aaPredicted RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 OR1E1P30953 314 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CCR1P32246 355 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CYP2C18P33260 490 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CCR10P46092 362 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 BST1Q10588 318 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 TAF10Q12962 218 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CSHL1Q14406 222 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 PPP1R15BQ5SWA1 713 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 RHBDF2Q6PJF5 856 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 TPGS1Q6ZTW0 290 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 SLC26A9Q7LBE3 791 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 DENND6AQ8IWF6 608 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 IFT43Q96FT9 208 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 PRR11Q96HE9 360 aaPredicted RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 MAGEB18Q96M61 343 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 SLC4A5Q9BY07 1137 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 TM6SF2Q9BZW4 377 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 BPIFA1Q9NP55 256 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 GKN1Q9NS71 199 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 AFF4Q9UHB7 1163 aaKnown RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 SCN1AP35498 2009 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 A0A0A0MRY4 1105 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 OR51F1A6NGY5 319 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 B2RBV5 119 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 NDC80O14777 642 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CRCPO75575 148 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 KRT16P08779 473 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 OR1D2P34982 312 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 SERPINB6P35237 376 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ACLYP53396 1101 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ZNF235Q14590 738 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ARHGAP17Q68EM7 881 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.69□□□□□ -1.183e-7■■■■□ 25.5
PKP4-217ENST00000628904 OTOP2Q7RTS6 562 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 SMC1BQ8NDV3 1235 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CASP10Q92851 521 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 CLPTM1LQ96KA5 538 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 SPATA13Q96N96 652 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 FTHL17Q9BXU8 183 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 ANLNQ9NQW6 1124 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 GRID1Q9ULK0 1009 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 SMG5Q9UPR3 1016 aaKnown RBP7.69□□□□□ -1.18
PKP4-217ENST00000628904 C5orf42Q9H799 3197 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 LTBP1Q14766 1721 aa7.69□□□□□ -1.18
PKP4-217ENST00000628904 F5P12259 2224 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ATP6AP2A0A1C7CYW4 349 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 PIRO00625 290 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ENTPD5O75356 428 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 GJB3O75712 270 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ATP6AP2O75787 350 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 DDHD2O94830 711 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 ACRP10323 421 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 SERPINB5P36952 375 aa7.68□□□□□ -1.18
PKP4-217ENST00000628904 CD86P42081 329 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms