RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 C2orf78A6NCI8 922 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 COCHO43405 550 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 IGLV3-27P01718 113 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 F11P03951 625 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 RBL1P28749 1068 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 PPP3CCP48454 512 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 TUBP50607 506 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 CLCN4P51793 760 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 KPNA1P52294 538 aaPredicted RBP10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 ERVK-21P61565 698 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 CALCOCO2Q13137 446 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 XRCC4Q13426 336 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 MAP7D1Q3KQU3 841 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 PIK3R6Q5UE93 754 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 MANEALQ5VSG8 457 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 RWDD4Q6NW29 188 aaKnown RBP10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 KLHDC10Q6PID8 442 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 PDZD4Q76G19 769 aaPredicted RBP10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 BZW1Q7L1Q6 419 aaKnown RBP10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 C14orf80Q86SX3 495 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 TMEM150AQ86TG1 271 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 CDKL3Q8IVW4 592 aaPredicted RBP10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 ATP6V0D2Q8N8Y2 350 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 FAM71DQ8N9W8 422 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 FBXO25Q8TCJ0 367 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 CCHCR1Q8TD31 782 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 ART4Q93070 314 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 CAVIN3Q969G5 261 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 TBC1D31Q96DN5 1066 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 C1orf74Q96LT6 269 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 OLFM3Q96PB7 478 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 CERS4Q9HA82 394 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 PCDH9Q9HC56 1237 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 WHRNQ9P202 907 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 SLC12A6Q9UHW9 1150 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 HBS1LQ9Y450 684 aaKnown RBP10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 ASB3Q9Y575 518 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 GBF1Q92538 1859 aa10.23□□□□□ -0.77
SOX2-OT-244ENST00000627738 BCLAF3A2AJT9 711 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 CFAP69A5D8W1 941 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 E9PAM4 449 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 H3BNC9 293 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 DNALI1O14645 258 aaPredicted RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 AXIN1O15169 862 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 CCL16O15467 120 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 KCNN4O15554 427 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 CLASP2O75122 1294 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 OAS1P00973 400 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 ITIH2P19823 946 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 GABRR2P28476 465 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 HOXC13P31276 330 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 STIP1P31948 543 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 HTR7P34969 479 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 RPL22P35268 128 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 KCNQ1P51787 676 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 ITGA8P53708 1063 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 NRLP54845 237 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 MLLT6P55198 1093 aaPredicted RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 NRG1Q02297 640 aaPredicted RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 RING1Q06587 406 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 GPS1Q13098 491 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 CASP8Q14790 479 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 P3H1Q32P28 736 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 EML3Q32P44 896 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 SLC45A4Q5BKX6 768 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 MS4A13Q5J8X5 152 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 PPM1LQ5SGD2 360 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 FAM182AQ5T1J6 154 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 ARTNQ5T4W7 220 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 IZUMO3Q5VZ72 239 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 RAP1GAP2Q684P5 730 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 NUGGCQ68CJ6 796 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 TREML4Q6UXN2 200 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 HDXQ7Z353 690 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 TMC8Q8IU68 726 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 TP53INP2Q8IXH6 220 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 ELMOD1Q8N336 334 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 NPWQ8N729 165 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 BBOF1Q8ND07 529 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 SLC22A17Q8WUG5 538 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 LRRC45Q96CN5 670 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 BTN2A3PQ96KV6 586 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 QKIQ96PU8 341 aaKnown RBP eCLIP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 FMO2Q99518 471 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 FUT8Q9BYC5 575 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 PBX4Q9BYU1 374 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 RNF38Q9H0F5 515 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 NKX2-4Q9H2Z4 354 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 CATSPERBQ9H7T0 1116 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 USP29Q9HBJ7 922 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 TRPC7Q9HCX4 862 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 GMPR2Q9P2T1 348 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 NEU3Q9UQ49 428 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 PCDHB11Q9Y5F2 797 aa10.22□□□□□ -0.77
SOX2-OT-244ENST00000627738 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.21□□□□□ -0.77
SOX2-OT-244ENST00000627738 GOLGA6L7A0A1B0GV03 622 aa10.21□□□□□ -0.77
SOX2-OT-244ENST00000627738 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.21□□□□□ -0.77
SOX2-OT-244ENST00000627738 HACD1B0YJ81 288 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms