RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 FAM124AQ86V42 546 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 APCDD1Q8J025 514 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 CCAR2Q8N163 923 aaKnown RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 HDDC3Q8N4P3 179 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 MSANTD4Q8NCY6 345 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 ANKRD20A12PQ8NF67 263 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 MYO19Q96H55 970 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 MRGPRX3Q96LB0 322 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 RPRD1AQ96P16 312 aaPredicted RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 PPP1R9BQ96SB3 815 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 NPY6RQ99463 290 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 PCED1AQ9H1Q7 454 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 RSPH9Q9H1X1 276 aaPredicted RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 MTG2Q9H4K7 406 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 SLC32A1Q9H598 525 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 WDCPQ9H6R7 721 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 FSCN3Q9NQT6 498 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 SCML1Q9UN30 329 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 NCKAP1Q9Y2A7 1128 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 DAAM1Q9Y4D1 1078 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 CEP250Q9BV73 2442 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 A0A1B0GTW7 788 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 A0A1B0GVM2 712 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 TARSL2A2RTX5 802 aaKnown RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 TCAF2A6NFQ2 919 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 OPHN1O60890 802 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 SIN3BO75182 1162 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 PAGE1O75459 146 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 GFPT2O94808 682 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 MBD3O95983 291 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 F9P00740 461 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 MMEP08473 750 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 PDGFRAP16234 1089 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 CDK11BP21127 795 aaKnown RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 ACSL1P33121 698 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 NNMTP40261 264 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 CTSOP43234 321 aaPredicted RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 SULT1E1P49888 294 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 PLK1P53350 603 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 POLR2FP61218 127 aaKnown RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 SULT2A1Q06520 285 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 ZNF177Q13360 481 aaPredicted RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 STX1AQ16623 288 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 BRMS1LQ5PSV4 323 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 C9orf64Q5T6V5 341 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 FAM102AQ5T9C2 384 aaPredicted RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 ZNF677Q86XU0 584 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 XYLT1Q86Y38 959 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 DHX40Q8IX18 779 aaKnown RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 EPS8L1Q8TE68 723 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 IGSF8Q969P0 613 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 NT5C3BQ969T7 300 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 BTBD1Q9H0C5 482 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 SIK2Q9H0K1 926 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 MIR1-1HGQ9H1L0 117 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 GANQ9H2C0 597 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 SGK2Q9HBY8 427 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 FAM207AQ9NSI2 230 aaPredicted RBP11.18□□□□□ -0.62
SSBP4-215ENST00000625926 PIGVQ9NUD9 493 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 SLCO3A1Q9UIG8 710 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 PAXBP1Q9Y5B6 917 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 HS3ST4Q9Y661 456 aa11.18□□□□□ -0.62
SSBP4-215ENST00000625926 EDDM13A0A1B0GTR0 161 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 LRRC10BA6NIK2 292 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 TTC34A8MYJ7 566 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 UPK3BL1B0FP48 263 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 UPK3BL2E5RIL1 263 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 GIPC1O14908 333 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 BCAT2O15382 392 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 CLDN11O75508 207 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 MZF1P28698 734 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 PMLP29590 882 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 SOX5P35711 763 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 CXCR3P49682 368 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 KLK7P49862 253 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 COPB1P53618 953 aaKnown RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 CDR2Q01850 454 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 MYL5Q02045 173 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 DEUP1Q05D60 604 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 SEMA3BQ13214 749 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 ST3GAL2Q16842 350 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 SLC25A52Q3SY17 297 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 CCDC183Q5T5S1 534 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 ACBD5Q5T8D3 534 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 USP30Q70CQ3 517 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 CIR1Q86X95 450 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 ZCCHC9Q8N567 271 aaKnown RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 MINDY1Q8N5J2 469 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 GANCQ8TET4 914 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 CPA5Q8WXQ8 436 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 PGAP3Q96FM1 320 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 RPL10LQ96L21 214 aaKnown RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 PCMTD1Q96MG8 357 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 SPAG5Q96R06 1193 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 ZDHHC5Q9C0B5 715 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 TKTL2Q9H0I9 626 aa11.17□□□□□ -0.62
SSBP4-215ENST00000625926 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 C6orf106Q9H6K1 298 aaPredicted RBP11.17□□□□□ -0.62
SSBP4-215ENST00000625926 ARHGEF38Q9NXL2 777 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms