RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GABRG2P18507 467 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 PDCLQ13371 301 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 ENPP2Q13822 863 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 STARD3Q14849 445 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 TCEAL1Q15170 157 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 GEN1Q17RS7 908 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 AASDHQ4L235 1098 aaPredicted RBP13.09□□□□□ -0.31
PNKP-217ENST00000625216 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 PHLDB2Q86SQ0 1253 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 METTL3Q86U44 580 aaKnown RBP13.09□□□□□ -0.31
PNKP-217ENST00000625216 RHOT2Q8IXI1 618 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 RNF10Q8N5U6 811 aaKnown RBP13.09□□□□□ -0.31
PNKP-217ENST00000625216 TPCN2Q8NHX9 752 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 SLC35G2Q8TBE7 412 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 DQX1Q8TE96 717 aaKnown RBP13.09□□□□□ -0.31
PNKP-217ENST00000625216 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 FAM149B1Q96BN6 582 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 TRIM11Q96F44 468 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 NOX5Q96PH1 765 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 CD248Q9HCU0 757 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 CACNA2D2Q9NY47 1150 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 TLR6Q9Y2C9 796 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 STON1Q9Y6Q2 735 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 MYOFQ9NZM1 2061 aa13.09□□□□□ -0.31
PNKP-217ENST00000625216 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 E5RJQ4 531 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 PAPSS1O43252 624 aaPredicted RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 MSI1O43347 362 aaKnown RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 TSPAN3O60637 253 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 PALMO75781 387 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 MTA2O94776 668 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 GJB6O95452 261 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 TUBB4AP04350 444 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 GLI1P08151 1106 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 MYBL1P10243 752 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 BCKDHBP21953 392 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 HADHBP55084 474 aaKnown RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 YWHAZP63104 245 aaKnown RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 SF3A2Q15428 464 aaKnown RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 DNTTIP2Q5QJE6 756 aaKnown RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 PIK3R6Q5UE93 754 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 PLEKHA7Q6IQ23 1121 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 CYP2U1Q7Z449 544 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 ERICH1Q86X53 443 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.08□□□□□ -0.32
PNKP-217ENST00000625216 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
PNKP-217ENST00000625216 RLN3Q8WXF3 142 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 ZNF592Q92610 1267 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 SLC39A13Q96H72 371 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 NUP85Q9BW27 656 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 POPDC2Q9HBU9 364 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 ASNSD1Q9NWL6 643 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 CTTNBP2NLQ9P2B4 639 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 CLEC4EQ9ULY5 219 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 NAALADL1Q9UQQ1 740 aa13.08□□□□□ -0.32
PNKP-217ENST00000625216 DNAH14Q0VDD8 3507 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 KHNYNO15037 678 aaKnown RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 GDF9O60383 454 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 SYNCRIPO60506 623 aaKnown RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 BUB1BO60566 1050 aaPredicted RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 CALB1P05937 261 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 NDUFV2P19404 249 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 CASQ1P31415 396 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 HOXD12P35452 270 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 DHPSP49366 369 aaPredicted RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 NAP1L1P55209 391 aaKnown RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 GSCP56915 257 aaPredicted RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 CCDC6Q16204 474 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 KIAA0907Q7Z7F0 614 aaPredicted RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 TRIM58Q8NG06 486 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 FCRL2Q96LA5 508 aaPredicted RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 MRGPRX1Q96LB2 322 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 TRIM7Q9C029 511 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 CIPCQ9C0C6 399 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 UVRAGQ9P2Y5 699 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 MBD1Q9UIS9 605 aaPredicted RBP13.07□□□□□ -0.32
PNKP-217ENST00000625216 PLA2G4CQ9UP65 541 aa13.07□□□□□ -0.32
PNKP-217ENST00000625216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 TYW5A2RUC4 315 aaKnown RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 WASH3PC4AMC7 463 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 FTCDO95954 541 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 APOEP02649 317 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 ATP1A1P05023 1023 aaKnown RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 ATP5BP06576 529 aaKnown RBP13.06□□□□□ -0.32
PNKP-217ENST00000625216 SLC2A3P11169 496 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 HLA-FP30511 346 aa13.06□□□□□ -0.32
PNKP-217ENST00000625216 IL12RB1P42701 662 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms