RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PYGMP11217 842 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 ARSAP15289 507 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 PTPN7P35236 360 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 SGSHP51688 502 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 RPS24P62847 133 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 DPYSQ14117 519 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 DHCR24Q15392 516 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 PPP2R5EQ16537 467 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 LY6G5CQ5SRR4 150 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 FYB2Q5VWT5 728 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 PAPD7Q5XG87 772 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 SYT10Q6XYQ8 523 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 TPRG1Q6ZUI0 275 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 FBXL6Q8N531 539 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 STIM2Q9P246 746 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 SNX12Q9UMY4 172 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 PIAS3Q9Y6X2 628 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 DOCK4Q8N1I0 1966 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 A0A1B0GVM2 712 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 TCAF2A6NFQ2 919 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 HOXC11O43248 304 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 ZNF500O60304 480 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 ADH1CP00326 375 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 RHOQP17081 205 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 CD72P21854 359 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 CETN2P41208 172 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 IRAK1P51617 712 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 STARD6P59095 220 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 MMRN1Q13201 1228 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 RUNX3Q13761 415 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 ITPRIPL2Q3MIP1 535 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 ANKRD20A8PQ5CZ79 823 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 TFDP3Q5H9I0 405 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 RWDD4Q6NW29 188 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 TPGS1Q6ZTW0 290 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 CHST9Q7L1S5 443 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 ANKS1BQ7Z6G8 1248 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 CCDC50Q8IVM0 306 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 CFAP52Q8N1V2 620 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 P2RY11Q96G91 374 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 RNF157Q96PX1 679 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 CATSPERBQ9H7T0 1116 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 ECT2Q9H8V3 914 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 TBC1D17Q9HA65 648 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 PRDM16Q9HAZ2 1276 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 ARHGEF4Q9NR80 690 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 MPP6Q9NZW5 540 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 EFR3BQ9Y2G0 817 aa20.42■□□□□ 0.86
PDLIM2-221ENST00000622702 hCG_1818297A0A087WSY0 165 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 WASH4PA8MWX3 477 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 CLDN11O75508 207 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 CNTN5O94779 1100 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 PRLRP16471 622 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 HOXD9P28356 352 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 CASQ1P31415 396 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 SOX9P48436 509 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 CDH4P55283 916 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 ZNF211Q13398 564 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 ALFQ53S48 1182 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 NLRP14Q86W24 1093 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 SUGP1Q8IWZ8 645 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 CPA6Q8N4T0 437 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 PCDH19Q8TAB3 1148 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 DDI1Q8WTU0 396 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 PSMB7Q99436 277 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 BBS2Q9BXC9 721 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 TMEM248Q9NWD8 314 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 ZNF212Q9UDV6 495 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 MYOFQ9NZM1 2061 aa20.41■□□□□ 0.86
PDLIM2-221ENST00000622702 OTOL1A6NHN0 477 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 CES2O00748 559 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 DCLK1O15075 740 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 DAPK3O43293 454 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 TBL1XO60907 577 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 ADH5P11766 374 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 GLULP15104 373 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 TCP1P17987 556 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 ERCC2P18074 760 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 GAD2Q05329 585 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 NR1H3Q13133 447 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 CWF19L1Q69YN2 538 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 RTL3Q8N8U3 475 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 PBKQ96KB5 322 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 OSBPL9Q96SU4 736 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 OSBPL8Q9BZF1 889 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 C8orf33Q9H7E9 229 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 DONSONQ9NYP3 566 aa20.4■□□□□ 0.86
PDLIM2-221ENST00000622702 KANSL1LA0AUZ9 987 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 AMPD1P23109 780 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 ANO4Q32M45 955 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 SEL1L2Q5TEA6 688 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 SLC9A4Q6AI14 798 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 AADACL2Q6P093 401 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 ZNF852Q6ZMS4 543 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 CIR1Q86X95 450 aaPredicted RBP20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 PQLC3Q8N755 202 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 FOXQ1Q9C009 403 aa20.39■□□□□ 0.85
PDLIM2-221ENST00000622702 SHISA7A6NL88 538 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 NEDD8-MDP1E9PL57 170 aa20.38■□□□□ 0.85
PDLIM2-221ENST00000622702 SPECC1L-ADORA2AF8WAN1 911 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms