RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	PAPOLA	P51003	745 aa	Known RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	NME3	Q13232	169 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	AAGAB	Q6PD74	315 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	PIGZ	Q86VD9	579 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	DEFB107A	Q8IZN7	70 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	CRYBG2	Q8N1P7	616 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	AGR3	Q8TD06	166 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	PPP1R13L	Q8WUF5	828 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	CMTM5	Q96DZ9	223 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	CPNE1	Q99829	537 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	COL1A2	P08123	1366 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	ZNF638	Q14966	1978 aa	Known RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	CCNT2	O60583	730 aa	Known RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	RECQL4	O94761	1208 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	RPL34	P49207	117 aa	Known RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	HARS2	P49590	506 aa	Known RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	RNF111	Q6ZNA4	994 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	FRMD7	Q6ZUT3	714 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	ZNF669	Q96BR6	464 aa	Predicted RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	HSFY1	Q96LI6	401 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	TUBGCP5	Q96RT8	1024 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	AGAP2	Q99490	1192 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	FAM96A	Q9H5X1	160 aa		18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	KLHL8	Q9P2G9	620 aa	Predicted RBP	18.17	■□□□□ 0.5
CDK16-223	ENST00000622098	KPNA7	A9QM74	516 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	CCNI	Q14094	377 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	TCHHL1	Q5QJ38	904 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	OTUD1	Q5VV17	481 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	STRA8	Q7Z7C7	330 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	ZNF410	Q86VK4	478 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	ZNF781	Q8N8C0	355 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	DCPS	Q96C86	337 aa	Known RBP	18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	EBF3	Q9H4W6	596 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	COG4	Q9H9E3	785 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	KLK14	Q9P0G3	267 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	PDP2	Q9P2J9	529 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK16-223	ENST00000622098		E9PBE3	544 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098		M0QYT0	321 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	KLHL41	O60662	606 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	MYL4	P12829	197 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	ALOX15	P16050	662 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	CUL3	Q13618	768 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	TTLL12	Q14166	644 aa	Predicted RBP	18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	CFAP157	Q5JU67	520 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	SPANXN3	Q5MJ09	141 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	GRTP1	Q5TC63	336 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	HPS6	Q86YV9	775 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	ACTRT2	Q8TDY3	377 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	CAB39L	Q9H9S4	337 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	CDHR5	Q9HBB8	845 aa		18.16	■□□□□ 0.5
CDK16-223	ENST00000622098	DEUP1	Q05D60	604 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	DLG2	Q15700	870 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	CCDC153	Q494R4	210 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	LPCAT4	Q643R3	524 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	FSTL4	Q6MZW2	842 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	PGM2L1	Q6PCE3	622 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	POTEA	Q6S8J7	498 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	NAPRT	Q6XQN6	538 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	OR6Y1	Q8NGX8	325 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	GBP5	Q96PP8	586 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	RBBP8	Q99708	897 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	GOLGA2P5	Q9HBQ8	144 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	SETD4	Q9NVD3	440 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	HSPA4L	O95757	839 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	ITGAX	P20702	1163 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	NDUFV1	P49821	464 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	IRF9	Q00978	393 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	DNAAF3	Q8N9W5	541 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	APPL2	Q8NEU8	664 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	PPP2R3C	Q969Q6	453 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	TRAPPC9	Q96Q05	1148 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	IGSF9	Q9P2J2	1179 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	ADAMTS6	Q9UKP5	1117 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	POMP	Q9Y244	141 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	EEF2K	O00418	725 aa	Known RBP	18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	CLDN5	O00501	218 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	ZBTB14	O43829	449 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	SERPINB6	P35237	376 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	SPR	P35270	261 aa	Predicted RBP	18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	SERPINB8	P50452	374 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	POLE2	P56282	527 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	SYPL2	Q5VXT5	272 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	ADGRG6	Q86SQ4	1221 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	OSMR	Q99650	979 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	VANGL2	Q9ULK5	521 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	UBQLN1	Q9UMX0	589 aa	Known RBP	18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	PCDHB12	Q9Y5F1	795 aa		18.15	■□□□□ 0.5
CDK16-223	ENST00000622098	RNASEH1	O60930	286 aa	Known RBP	18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	TBL3	Q12788	808 aa	Known RBP	18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	SLC9B1	Q4ZJI4	515 aa		18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	HSP90AA5P	Q58FG0	334 aa		18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	ANKRD13A	Q8IZ07	590 aa		18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	LRRC40	Q9H9A6	602 aa		18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	CDY2A	Q9Y6F7	541 aa		18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	CDY1	Q9Y6F8	540 aa		18.14	■□□□□ 0.49
CDK16-223	ENST00000622098		A0A096LPK6	155 aa		18.14	■□□□□ 0.49
CDK16-223	ENST00000622098	XPO1	O14980	1071 aa	Known RBP	18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms