RNA–Protein interactions for RNA: ENST00000621069.1

KRBA1-209, Transcript of KRAB-A domain containing 1, humanhuman

TSL 1 (best)

Gene KRBA1, Length 3,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-209ENST00000621069 KATNAL2Q8IYT4 538 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 LRRC45Q96CN5 670 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 TRIM56Q9BRZ2 755 aaKnown RBP12.9□□□□□ -0.35
KRBA1-209ENST00000621069 DCLK3Q9C098 648 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 NOD2Q9HC29 1040 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 CLDND1Q9NY35 253 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 DDX56Q9NY93 547 aaKnown RBP12.9□□□□□ -0.35
KRBA1-209ENST00000621069 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 SLC12A6Q9UHW9 1150 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 CCL26Q9Y258 94 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 SH3BP1Q9Y3L3 701 aa12.9□□□□□ -0.35
KRBA1-209ENST00000621069 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.89□□□□□ -0.35
KRBA1-209ENST00000621069 FOXO6A8MYZ6 492 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 H3BRJ5 948 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 LINC01565O15544 149 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 CSH1P0DML2 217 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 CSH2P0DML3 217 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 OR1E1P30953 314 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 VIPR2P41587 438 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 SEMG2Q02383 582 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 ZKSCAN8Q15776 578 aaPredicted RBP12.89□□□□□ -0.35
KRBA1-209ENST00000621069 UBAP2Q5T6F2 1119 aaKnown RBP12.89□□□□□ -0.35
KRBA1-209ENST00000621069 MRPL43Q8N983 215 aaKnown RBP12.89□□□□□ -0.35
KRBA1-209ENST00000621069 CCDC63Q8NA47 563 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 STK32AQ8WU08 396 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 DYDC1Q8WWB3 177 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 MYEOVQ96EZ4 313 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 TNFRSF10BO14763 440 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 CLGNO14967 610 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 CHN1P15882 459 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
KRBA1-209ENST00000621069 SESN2P58004 480 aaPredicted RBP12.89□□□□□ -0.35
KRBA1-209ENST00000621069 SLC10A2Q12908 348 aaPredicted RBP12.89□□□□□ -0.35
KRBA1-209ENST00000621069 SLC8B1Q6J4K2 584 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 ZNF366Q8N895 744 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 FAF2Q96CS3 445 aa12.89□□□□□ -0.35
KRBA1-209ENST00000621069 ZDBF2Q9HCK1 2354 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 C2orf71A6NGG8 1288 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ENO4A6NNW6 628 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 TMEM189-UBE2V1I3L0A0 370 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 TRIM24O15164 1050 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 IZUMO3Q5VZ72 239 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 TRIM68Q6AZZ1 485 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 RFX8Q6ZV50 586 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ZDHHC17Q8IUH5 632 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 PLD5Q8N7P1 536 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 RPL10LQ96L21 214 aaKnown RBP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 MUC3BQ9H195 1237 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ARHGEF4Q9NR80 690 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 IL1RAPL1Q9NZN1 696 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ANAPC5Q9UJX4 755 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 A8MUI8 341 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 IRAK2O43187 625 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 PMPCBO75439 489 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 TPH1P17752 444 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 CCR2P41597 374 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ITGA8P53708 1063 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ITIH3Q06033 890 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 TFDP2Q14188 446 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 C6orf89Q6UWU4 347 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 CES3Q6UWW8 571 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ARHGEF18Q6ZSZ5 1173 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 GAREM2Q75VX8 874 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 HERVK_113Q902F9 699 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 FUBP3Q96I24 572 aaKnown RBP eCLIP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 PRMT1Q99873 361 aaKnown RBP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ACTR5Q9H9F9 607 aaPredicted RBP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 TRANK1O15050 2925 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 H0Y626 953 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 BUD23O43709 281 aaKnown RBP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 OTUD1Q5VV17 481 aaPredicted RBP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 Q7L0L9 218 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 UBE2Q1Q7Z7E8 422 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 CCDC197Q8NCU1 140 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 OR7D4Q8NG98 312 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 KCTD13Q8WZ19 329 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 SERPINB11Q96P15 392 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 PKMYT1Q99640 499 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
KRBA1-209ENST00000621069 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
KRBA1-209ENST00000621069 COL4A6Q14031 1691 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 DPYSL4O14531 572 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 MTA2O94776 668 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 PIRTP0C851 137 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 IFI35P80217 286 aaPredicted RBP12.87□□□□□ -0.35
KRBA1-209ENST00000621069 AUHQ13825 339 aaKnown RBP12.87□□□□□ -0.35
KRBA1-209ENST00000621069 MRPL58Q14197 206 aaKnown RBP12.87□□□□□ -0.35
KRBA1-209ENST00000621069 LRRC34Q8IZ02 419 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 ANKRD42Q8N9B4 389 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 RSRC1Q96IZ7 334 aaKnown RBP12.87□□□□□ -0.35
KRBA1-209ENST00000621069 VPS37BQ9H9H4 285 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 CSNK1G1Q9HCP0 422 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
KRBA1-209ENST00000621069 HS3ST4Q9Y661 456 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms