RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 ARL8BQ9NVJ2 186 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 GPRC5DQ9NZD1 345 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TRMT6Q9UJA5 497 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 IPPQ9Y573 584 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 PPP2R3BQ9Y5P8 575 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 CCNE2O96020 404 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 C4BPAP04003 597 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 VCLP18206 1134 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 PTPRAP18433 802 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 LHX1P48742 406 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TRPC1P48995 793 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 BST1Q10588 318 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 SFSWAPQ12872 951 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 NFYCQ13952 458 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 PARP6Q2NL67 630 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 RIPOR1Q6ZS17 1223 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TRAPPC9Q96Q05 1148 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 YME1L1Q96TA2 773 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 SMAD5Q99717 465 aaKnown RBP8.52□□□□□ -1.05
ALMS1-208ENST00000620466 LRMDAQ9H2I8 198 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 SPASTQ9UBP0 616 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 LZTS1Q9Y250 596 aa8.52□□□□□ -1.05
ALMS1-208ENST00000620466 TCRBV9S1A1TA0A576 114 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ALOX15P16050 662 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CDK7P50613 346 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SLC1A5Q15758 541 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PGS1Q32NB8 556 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TRIM60Q495X7 471 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SLC27A1Q6PCB7 646 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ZDHHC24Q6UX98 284 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RINLQ6ZS11 566 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MAGEC3Q8TD91 643 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 P2RX7Q99572 595 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 OSBPL10Q9BXB5 764 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 NRDE2Q9H7Z3 1164 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 NMRAL1Q9HBL8 299 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 NT5MQ9NPB1 228 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 NMRK2Q9NPI5 230 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 FBXO6Q9NRD1 293 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CACNA2D2Q9NY47 1150 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RPS6KB2Q9UBS0 482 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SAC3D1A6NKF1 404 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 C2orf81A6NN90 581 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 USP12O75317 370 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MTA2O94776 668 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TRIM16O95361 564 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 HADHBP55084 474 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RTP1P59025 263 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 FASTKD3Q14CZ7 662 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PLEKHA7Q6IQ23 1121 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MRNIPQ6NTE8 343 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RNF148Q8N7C7 305 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 HASPINQ8TF76 798 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 DPF3Q92784 378 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MAGEB10Q96LZ2 347 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MBOAT7Q96N66 472 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CDRT15Q96T59 188 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PHACTR1Q9C0D0 580 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 COPS7BQ9H9Q2 264 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ZDHHC18Q9NUE0 388 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TBC1D13Q9NVG8 400 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 TIMM13Q9Y5L4 95 aaPredicted RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 C2orf71A6NGG8 1288 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 KCNK1O00180 336 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RNASEH1O60930 286 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ABCG1P45844 678 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SLC16A1P53985 500 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PRKAA2P54646 552 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 YWHAZP63104 245 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CNTN1Q12860 1018 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CELF3Q5SZQ8 465 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SCARA3Q6AZY7 606 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SH3BP5LQ7L8J4 393 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ZNF438Q7Z4V0 828 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PLEKHH3Q7Z736 793 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SLC22A9Q8IVM8 553 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 FITM2Q8N6M3 262 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MARK4Q96L34 752 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 RNF19AQ9NV58 838 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MAP10Q9P2G4 905 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CNTNAP2Q9UHC6 1331 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 A0A0A0MRY4 1105 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 MAP3K13O43283 966 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ZMPSTE24O75844 475 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ZNF23P17027 643 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ATP6V1C1P21283 382 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 YY1P25490 414 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 CD151P48509 253 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PLIN5Q00G26 463 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 UMODL1Q5DID0 1318 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ERO1BQ86YB8 467 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 OR52K1Q8NGK4 314 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 SNRNP27Q8WVK2 155 aaKnown RBP8.51□□□□□ -1.05
ALMS1-208ENST00000620466 ANKRD49Q8WVL7 239 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 FBXO32Q969P5 355 aa8.51□□□□□ -1.05
ALMS1-208ENST00000620466 PHF21BQ96EK2 531 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms