RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 NFATC3Q12968 1075 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 UBAP2LQ14157 1087 aaKnown RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 ZNF846Q147U1 533 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 STILQ15468 1287 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 EPC2Q52LR7 807 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 GALNT18Q6P9A2 607 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 RALGPS2Q86X27 583 aaPredicted RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 KBTBD7Q8WVZ9 684 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 TTC9Q92623 222 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 CIB1Q99828 191 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 TUFT1Q9NNX1 390 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 PCDH12Q9NPG4 1184 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 SCUBE2Q9NQ36 999 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 ANLNQ9NQW6 1124 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 SUCOQ9UBS9 1254 aaKnown RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 ANAPC7Q9UJX3 599 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 SPEF1Q9Y4P9 236 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 SMCHD1A6NHR9 2005 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 FAM155AB1AL88 458 aaPredicted RBP10.61□□□□□ -0.71
VPS11-207ENST00000620429 CLPXO76031 633 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 IL32P24001 234 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 ETFBP38117 255 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 PHC1P78364 1004 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 COL19A1Q14993 1142 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 KRT80Q6KB66 452 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 TMC5Q6UXY8 1006 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 AKAP14Q86UN6 197 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 SLC9A9Q8IVB4 645 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 FAM71AQ8IYT1 594 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 ELMOD2Q8IZ81 293 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 LILRA2Q8N149 483 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 GMLQ99445 158 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 SLC29A1Q99808 456 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 NPLQ9BXD5 320 aaPredicted RBP10.61□□□□□ -0.71
VPS11-207ENST00000620429 C12orf65Q9H3J6 166 aaKnown RBP10.61□□□□□ -0.71
VPS11-207ENST00000620429 AVENQ9NQS1 362 aaPredicted RBP10.61□□□□□ -0.71
VPS11-207ENST00000620429 C1orf232A0A0U1RR37 186 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 PRSS51A0A1B0GVH4 220 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 I3L4J1 428 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 K7ENM7 598 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 LPXNO60711 386 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 ITGAXP20702 1163 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 GPD2P43304 727 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 AQP5P55064 265 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 B2MP61769 119 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 TSPY1Q01534 308 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 CENPCQ03188 943 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 PRKCQQ04759 706 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 DPYSQ14117 519 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 OTOP1Q7RTM1 612 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 ARID3BQ8IVW6 561 aaPredicted RBP10.61□□□□□ -0.71
VPS11-207ENST00000620429 MRRFQ96E11 262 aaKnown RBP10.61□□□□□ -0.71
VPS11-207ENST00000620429 KREMEN1Q96MU8 473 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 VPS35Q96QK1 796 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 COQ7Q99807 217 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 CLSTN3Q9BQT9 956 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 CALN1Q9BXU9 219 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 OR2B2Q9GZK3 357 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 TRIT1Q9H3H1 467 aaKnown RBP10.61□□□□□ -0.71
VPS11-207ENST00000620429 VPS37BQ9H9H4 285 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 FBXO28Q9NVF7 368 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 BCAP29Q9UHQ4 241 aa10.61□□□□□ -0.71
VPS11-207ENST00000620429 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 SNTNA6NMZ2 147 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 RNF103O00237 685 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 ENPP3O14638 875 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 SPAG6O75602 509 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 ADSSP30520 456 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 CDH15P55291 814 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 LRIT3Q3SXY7 679 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 PPP6R3Q5H9R7 873 aaPredicted RBP10.6□□□□□ -0.71
VPS11-207ENST00000620429 FAM47CQ5HY64 1035 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 C6orf10Q5SRN2 563 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 NDUFAF5Q5TEU4 345 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 IDO2Q6ZQW0 420 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 LURAP1LQ8IV03 231 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 DEFB107AQ8IZN7 70 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 CLIP4Q8N3C7 705 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 APOPT1Q96IL0 206 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 RMDN3Q96TC7 470 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 ANKRD60Q9BZ19 345 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 NANOGQ9H9S0 305 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 NEK6Q9HC98 313 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 C7orf72A4D263 438 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 CLDN25C9JDP6 229 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 CFBP00751 764 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 MCF2P10911 925 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 CYP11B1P15538 503 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 NR4A2P43354 598 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 SLC18A2Q05940 514 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 INAVAQ3KP66 663 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 ATG16L1Q676U5 607 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 GSTA5Q7RTV2 222 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 TMEM102Q8N9M5 508 aaPredicted RBP10.6□□□□□ -0.71
VPS11-207ENST00000620429 ZSWIM2Q8NEG5 633 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 TTC17Q96AE7 1141 aa10.6□□□□□ -0.71
VPS11-207ENST00000620429 CBWD1Q9BRT8 395 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms