RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RFWD3Q6PCD5 774 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 DRICH1Q6PGQ1 229 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 C1orf228Q6PIY5 440 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 TMCO3Q6UWJ1 677 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 BZW1Q7L1Q6 419 aaKnown RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 NLRP14Q86W24 1093 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 ADGRG2Q8IZP9 1017 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 RTL3Q8N8U3 475 aaKnown RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 TTC16Q8NEE8 873 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 RIN3Q8TB24 985 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 ACTL9Q8TC94 416 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 C1orf54Q8WWF1 131 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 P3H4Q92791 437 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 WNT2BQ93097 391 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 MAGOHBQ96A72 148 aaKnown RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 OTUB2Q96DC9 234 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 RSPRY1Q96DX4 576 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 MYEOVQ96EZ4 313 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 LINC00597Q9H2U6 94 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 POMKQ9H5K3 350 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 UBE2ZQ9H832 354 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 ZFP14Q9HCL3 533 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 TMEM248Q9NWD8 314 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 PLA2G2EQ9NZK7 142 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 MPP6Q9NZW5 540 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 SAE1Q9UBE0 346 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 NEU3Q9UQ49 428 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 DRG1Q9Y295 367 aaKnown RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 R3HDM2Q9Y2K5 976 aaKnown RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 USP15Q9Y4E8 981 aaPredicted RBP8.26□□□□□ -1.09
CPNE3-209ENST00000620393 RAD54BQ9Y620 910 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 PATJQ8NI35 1801 aa8.26□□□□□ -1.09
CPNE3-209ENST00000620393 GREB1Q4ZG55 1949 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 MTCL1Q9Y4B5 1905 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 HEPACAM2A8MVW5 462 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 TRDMT1O14717 391 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 SCAMP3O14828 347 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 TSPAN3O60637 253 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 CLDN11O75508 207 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 PECAM1P16284 738 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 KCNA5P22460 613 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 FCARP24071 287 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 CHRNA3P32297 505 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 GBP2P32456 591 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 COILP38432 576 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 IRAK1P51617 712 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 CDH4P55283 916 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 RPS24P62847 133 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 OTUD4Q01804 1114 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 GBE1Q04446 702 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 USP4Q13107 963 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 XRCC4Q13426 336 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 SMAD4Q13485 552 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 PROX2Q3B8N5 592 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 MPPE1Q53F39 396 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 MPP7Q5T2T1 576 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 AFMIDQ63HM1 303 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 NPNTQ6UXI9 565 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 CHST9Q7L1S5 443 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 OTOP3Q7RTS5 596 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 MFSD6LQ8IWD5 586 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 CFAP52Q8N1V2 620 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 UMODL1-AS1Q8N2C9 162 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 MMGT1Q8N4V1 131 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 C12orf50Q8NA57 414 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 TDRD5Q8NAT2 981 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 ATL2Q8NHH9 583 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 SLC35B2Q8TB61 432 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 BPIFB1Q8TDL5 484 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 PPM1EQ8WY54 764 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 IRF7Q92985 503 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 HLA-CQ95604 372 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 NKD2Q969F2 451 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 KLC2Q9H0B6 622 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 RBM12Q9NTZ6 932 aaKnown RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 DTLQ9NZJ0 730 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 EPS15L1Q9UBC2 864 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF212Q9UDV6 495 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 FEZ2Q9UHY8 353 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-209ENST00000620393 MFHAS1Q9Y4C4 1052 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 HEY1Q9Y5J3 304 aa8.25□□□□□ -1.09
CPNE3-209ENST00000620393 TRANK1O15050 2925 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 NCAM2O15394 837 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 MBTPS2O43462 519 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 LIASO43766 372 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 TBL1XO60907 577 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 PHF2O75151 1096 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 CYBBP04839 570 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 MX2P20592 715 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 STIP1P31948 543 aaKnown RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 SERPINB6P35237 376 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 KCNJ1P48048 391 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 MAPKAPK2P49137 400 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 FNTAP49354 379 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 SGSHP51688 502 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 NDST2P52849 883 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 VCPP55072 806 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms