RNA–Protein interactions for RNA: ENST00000620254.4

CYFIP2-222, Transcript of cytoplasmic FMR1 interacting protein 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP2, Length 4,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-222	ENST00000620254	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	COCH	O43405	550 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CREB1	P16220	341 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	MLLT6	P55198	1093 aa	Predicted RBP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	PPP1R21	Q6ZMI0	780 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	OTOP3	Q7RTS5	596 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	PABPC5	Q96DU9	382 aa	Known RBP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HERC2P3	Q9BVR0	1158 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CLIC5	Q9NZA1	410 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CLUH	O75153	1309 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ZNF840P	A6NDX5	716 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	GCAT	O75600	419 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	BAIAP3	O94812	1187 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HMGA1	P17096	107 aa	Known RBP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	GPX6	P59796	221 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	TRIP4	Q15650	581 aa	Predicted RBP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HECTD3	Q5T447	861 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CES3	Q6UWW8	571 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CTAGE3P	Q8IX95	158 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	LGI2	Q8N0V4	545 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	FBF1	Q8TES7	1133 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	C2orf15	Q8WU43	125 aa	Known RBP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	DPF3	Q92784	378 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	C5orf60	A6NFR6	353 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HACD1	B0YJ81	288 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	NFKB1	P19838	968 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ETFB	P38117	255 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	GNGT1	P63211	74 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CYP4F8	P98187	520 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ITK	Q08881	620 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	TXNDC8	Q6A555	127 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CYP4X1	Q8N118	509 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	AGGF1	Q8N302	714 aa	eCLIP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	SLC39A13	Q96H72	371 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	KLHL5	Q96PQ7	755 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CCDC77	Q9BR77	488 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	UBE2O	Q9C0C9	1292 aa	Known RBP	13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	RNF38	Q9H0F5	515 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	INSL5	Q9Y5Q6	135 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	COL4A6	Q14031	1691 aa		13.6	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HIDE1	A8MVS5	230 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ALOX15B	O15296	676 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CHAD	O15335	359 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	TGM5	O43548	720 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ABLIM3	O94929	683 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CP	P00450	1065 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CSH1	P0DML2	217 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CSH2	P0DML3	217 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	MX2	P20592	715 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ERVFC1	P60507	584 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	MSANTD2	Q6P1R3	559 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	WBP2	Q969T9	261 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	RTP4	Q96DX8	246 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	SLC22A12	Q96S37	553 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	C17orf80	Q9BSJ5	609 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	KCNK9	Q9NPC2	374 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	IL37	Q9NZH6	218 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	DNMT3L	Q9UJW3	386 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	INSL6	Q9Y581	213 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254		A0A087WUV0	522 aa	Predicted RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	SLC2A3	P11169	496 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	PPM1A	P35813	382 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	PSEN1	P49768	467 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	BEND5	Q7L4P6	421 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	TAX1BP1	Q86VP1	789 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CAND1	Q86VP6	1230 aa	Known RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HERC6	Q8IVU3	1022 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	SRRM1	Q8IYB3	904 aa	Known RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	SLC22A17	Q8WUG5	538 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	EXOC4	Q96A65	974 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	PPAN	Q9NQ55	473 aa	Known RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	OLA1	Q9NTK5	396 aa	Known RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	IL1RAPL1	Q9NZN1	696 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	CHD9	Q3L8U1	2897 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	FAM92A	A1XBS5	289 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	TTC24	A2A3L6	582 aa	Predicted RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	MBL2	P11226	248 aa	Predicted RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	PAPOLA	P51003	745 aa	Known RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	EPHB3	P54753	998 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	C6orf118	Q5T5N4	469 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HS6ST3	Q8IZP7	471 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ANKRD42	Q8N9B4	389 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	DNAAF3	Q8N9W5	541 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ATP11C	Q8NB49	1132 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	SPATA22	Q8NHS9	363 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	BTN2A3P	Q96KV6	586 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	NEU3	Q9UQ49	428 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	C5orf42	Q9H799	3197 aa		13.59	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ARHGAP42	A6NI28	874 aa		13.58	□□□□□ -0.23
CYFIP2-222	ENST00000620254	EFEMP2	O95967	443 aa		13.58	□□□□□ -0.23
CYFIP2-222	ENST00000620254	HCAR3	P49019	387 aa		13.58	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ZNF697	Q5TEC3	545 aa		13.58	□□□□□ -0.23
CYFIP2-222	ENST00000620254	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.58	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ARHGAP12	Q8IWW6	846 aa		13.58	□□□□□ -0.23
CYFIP2-222	ENST00000620254	ATXN3L	Q9H3M9	355 aa		13.58	□□□□□ -0.23
CYFIP2-222	ENST00000620254	TPH1	P17752	444 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms