RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 PTPN7P35236 360 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 RPL14P50914 215 aaKnown RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 NME5P56597 212 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 CACNB2Q08289 660 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 NRF1Q16656 503 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 CCL15Q16663 113 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 TNFAIP8L3Q5GJ75 292 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 BTBD8Q5XKL5 378 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 CYP2R1Q6VVX0 501 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 ZBTB49Q6ZSB9 765 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 KIAA0319LQ8IZA0 1049 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 GALNT15Q8N3T1 639 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 PCDH20Q8N6Y1 951 aaKnown RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 PCDH19Q8TAB3 1148 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 AFG1LQ8WV93 481 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 PRR11Q96HE9 360 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 NDNQ99608 321 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 GORASP1Q9BQQ3 440 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 SEMA6AQ9H2E6 1030 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 EBF3Q9H4W6 596 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 WDR55Q9H6Y2 383 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 ACSS2Q9NR19 701 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 CDH22Q9UJ99 828 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 COMMD3-BMI1R4GMX3 469 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 PEX1O43933 1283 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 PEX10O60683 326 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 VCLP18206 1134 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 RGS2P41220 211 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 ASPAP45381 313 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 WNT7BP56706 349 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 TMEM79Q9BSE2 394 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 NIFKQ9BYG3 293 aaKnown RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 COG4Q9H9E3 785 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 FARP1Q9Y4F1 1045 aaPredicted RBP12.58□□□□□ -0.4
SPCS1-206ENST00000619898 TEX264Q9Y6I9 313 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 V9GYQ6 96 aa12.58□□□□□ -0.4
SPCS1-206ENST00000619898 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 C2CD4BA6NLJ0 364 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PLIN3O60664 434 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 CYP2C9P11712 490 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 MAP3K7CLP57077 242 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 SLC18A2Q05940 514 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 KLF10Q13118 480 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 ANO4Q32M45 955 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 ADGRF2Q8IZF7 708 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 DIS3LQ8TF46 1054 aaKnown RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 GFM2Q969S9 779 aaKnown RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 RCN3Q96D15 328 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PABPC5Q96DU9 382 aaKnown RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 IFT43Q96FT9 208 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 CAB39LQ9H9S4 337 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 SP110Q9HB58 689 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 HMGXB4Q9UGU5 601 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PPM1HQ9ULR3 514 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 ANGPTL3Q9Y5C1 460 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 NR2E3Q9Y5X4 410 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 CNTNAP2Q9UHC6 1331 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 AKAP5P24588 427 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 TKTL1P51854 596 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 EML3Q32P44 896 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 C9orf131Q5VYM1 1079 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 TSPAN17Q96FV3 270 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 ACE2Q9BYF1 805 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 MRGBPQ9NV56 204 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 COPG2Q9UBF2 871 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 MORF4L1Q9UBU8 362 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PAPPAQ13219 1627 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 SMIM31A0A1B0GVY4 71 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 RGSL1A5PLK6 1076 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 HDAC3O15379 428 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 VAPBO95292 243 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 METTL18O95568 372 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PIGRP01833 764 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PNPLA4P41247 253 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 GRIA1P42261 906 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 ABL2P42684 1182 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 ADRM1Q16186 407 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 LCLAT1Q6UWP7 414 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 C15orf39Q6ZRI6 1047 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PQLC1Q8N2U9 271 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PDCD6IPQ8WUM4 868 aaKnown RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 SKA1Q96BD8 255 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 P2RY11Q96G91 374 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 TUBGCP5Q96RT8 1024 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 CCDC167Q9P0B6 97 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 SLC17A6Q9P2U8 582 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 BAG5Q9UL15 447 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 C15orf38-AP3S2A0A0A6YYH1 394 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 TRAFD1O14545 582 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PAPSS1O43252 624 aaPredicted RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 RPL5P46777 297 aaKnown RBP12.57□□□□□ -0.4
SPCS1-206ENST00000619898 CA9Q16790 459 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PLEKHG4Q58EX7 1191 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 PMF1Q6P1K2 205 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 ARPINQ7Z6K5 226 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 TREML1Q86YW5 311 aa12.57□□□□□ -0.4
SPCS1-206ENST00000619898 FBXW8Q8N3Y1 598 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms