RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SPAG17Q6Q759 2223 aa5.44□□□□□ -1.54
SHMT1-211ENST00000618902 GON4LQ3T8J9 2241 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 SYNJ2BP-COX16A0A087WUM0 186 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 A0A0U1RQJ8 604 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CXorf51AA0A1B0GTR3 108 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 RCCD1A6NED2 376 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 SIGLEC16A6NMB1 481 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 KCNU1A8MYU2 1149 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 GOLGA8KD6RF30 607 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 ZBTB24O43167 697 aaPredicted RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 RTN2O75298 545 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 ALDH1A2O94788 518 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 ENDOD1O94919 500 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CYBBP04839 570 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CYP1A2P05177 515 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CALB1P05937 261 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 SP9P0CG40 484 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 C7P10643 843 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 NCAM1P13591 858 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 TCF4P15884 667 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 TARSP26639 723 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 OAS2P29728 719 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CORO1AP31146 461 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 HOXC13P31276 330 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 GJA4P35212 333 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 NOS2P35228 1153 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 HOXD12P35452 270 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 GGCXP38435 758 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 OPRD1P41143 372 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 MATKP42679 507 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 NSFP46459 744 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 SLC6A11P48066 632 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 HARS2P49590 506 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CXCR3P49682 368 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 DGKEP52429 567 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 GALCP54803 685 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 OXCT1P55809 520 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 TBX4P57082 545 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 MAMLD1Q13495 774 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 DHCR24Q15392 516 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 EFHC1Q5JVL4 640 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 LY6G5CQ5SRR4 150 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 PIK3R6Q5UE93 754 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 DAB2IPQ5VWQ8 1189 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 RNF43Q68DV7 783 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 ALKBH5Q6P6C2 394 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CYP4V2Q6ZWL3 525 aaPredicted RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 RABEPKQ7Z6M1 372 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 C14orf80Q86SX3 495 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CROCCP2Q86T23 111 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 VPS36Q86VN1 386 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 LONP2Q86WA8 852 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 DENND1CQ8IV53 801 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 FAM217AQ8IXS0 508 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 ZNF683Q8IZ20 524 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 PHTF2Q8N3S3 785 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 KDM1BQ8NB78 822 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 WFDC5Q8TCV5 224 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 COG1Q8WTW3 980 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 RNF139Q8WU17 664 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CENPIQ92674 756 aaPredicted RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 ZNF653Q96CK0 615 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 BTBD6Q96KE9 485 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CFAP57Q96MR6 1250 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 PNKPQ96T60 521 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 PRMT1Q99873 361 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 FOXQ1Q9C009 403 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 DEF6Q9H4E7 631 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 FBRSQ9HAH7 460 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 POPDC2Q9HBU9 364 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 SPHK2Q9NRA0 654 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 DDIT4Q9NX09 232 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 COX16Q9P0S2 106 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 DEC1Q9P2X7 70 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 CNOT8Q9UFF9 292 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 SLC12A6Q9UHW9 1150 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 HCN2Q9UL51 889 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 RAB23Q9ULC3 237 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 INTUQ9ULD6 942 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 TPX2Q9ULW0 747 aaKnown RBP5.43□□□□□ -1.54
SHMT1-211ENST00000618902 GUCA1BQ9UMX6 200 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 SLC27A6Q9Y2P4 619 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 PCDHGA5Q9Y5G8 931 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 PCDHA13Q9Y5I0 950 aa5.43□□□□□ -1.54
SHMT1-211ENST00000618902 TYW5A2RUC4 315 aaKnown RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM191CA6NGB0 347 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PRR5-ARHGAP8B1AHC4 643 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FAM72CH0Y354 149 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 M0QYT0 321 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PI15O43692 258 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 AKR1B10O60218 316 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 CACNG3O60359 315 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ACSL4O60488 711 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 TSPAN3O60637 253 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 MOCS2O96007 188 aaPredicted RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 F9P00740 461 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 APODP05090 189 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 DCNP07585 359 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms