RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 RLN3Q8WXF3 142 aa25.67■■□□□ 1.7
PMS1-220ENST00000618056 CENPIQ92674 756 aaPredicted RBP25.67■■□□□ 1.7
PMS1-220ENST00000618056 HAPLN3Q96S86 360 aa25.67■■□□□ 1.7
PMS1-220ENST00000618056 SYNCRIPO60506 623 aaKnown RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 ZNF217O75362 1048 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 GJB6O95452 261 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 EPHX1P07099 455 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 GZMAP12544 262 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 GGCXP38435 758 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 PLK1P53350 603 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 OXCT1P55809 520 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 KLHL30Q0D2K2 578 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 PLEKHG6Q3KR16 790 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 METTL3Q86U44 580 aaKnown RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 CIR1Q86X95 450 aaPredicted RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 KDM1BQ8NB78 822 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 SYN2Q92777 582 aaPredicted RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 TAS2R14Q9NYV8 317 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 PCDHGA5Q9Y5G8 931 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 NYNRINQ9P2P1 1898 aaKnown RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 CLDN11O75508 207 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 TPM3P06753 285 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 C7P10643 843 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 BCKDHBP21953 392 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 IRAK1P51617 712 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 CAMK2GQ13555 558 aaPredicted RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 C15orf59Q2T9L4 293 aaPredicted RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 PPP1R15BQ5SWA1 713 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 CXorf57Q6NSI4 855 aaKnown RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 DNAJC24Q6P3W2 148 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 WDR59Q6PJI9 974 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 FAM131BQ86XD5 332 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 KIAA2013Q8IYS2 634 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 ERLEC1Q96DZ1 483 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 MYO19Q96H55 970 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 MKRN2Q9H000 416 aaKnown RBP25.66■■□□□ 1.7
PMS1-220ENST00000618056 CAPN11Q9UMQ6 739 aa25.66■■□□□ 1.7
PMS1-220ENST00000618056 HLA-EP13747 358 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 CDH4P55283 916 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 ZBED6P86452 979 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 SPEM2Q0P670 501 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 XPO4Q9C0E2 1151 aaKnown RBP25.65■■□□□ 1.7
PMS1-220ENST00000618056 PRDM16Q9HAZ2 1276 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 PARD6AQ9NPB6 346 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 TMPRSS4Q9NRS4 437 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 MBD1Q9UIS9 605 aaPredicted RBP25.65■■□□□ 1.7
PMS1-220ENST00000618056 TBC1D30Q9Y2I9 924 aa25.65■■□□□ 1.7
PMS1-220ENST00000618056 ITIH6Q6UXX5 1313 aa25.64■■□□□ 1.7
PMS1-220ENST00000618056 CHD5Q8TDI0 1954 aa25.64■■□□□ 1.7
PMS1-220ENST00000618056 IGLV3-10A0A075B6K4 115 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 DRGXA6NNA5 263 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 SRPRAP08240 638 aaKnown RBP25.64■■□□□ 1.69
PMS1-220ENST00000618056 GPD1P21695 349 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 RRM1P23921 792 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 COPAP53621 1224 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 CDO1Q16878 200 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 RAB6CQ53S08 254 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 SPDYCQ5MJ68 293 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 SH3PXD2AQ5TCZ1 1133 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 LRRC31Q6UY01 552 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 FRMD1Q8N878 549 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 MRGPRX3Q96LB0 322 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 PPP1R9BQ96SB3 815 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 RAB6CQ9H0N0 254 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 SLC6A17Q9H1V8 727 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 FBRSQ9HAH7 460 aa25.64■■□□□ 1.69
PMS1-220ENST00000618056 BZW2Q9Y6E2 419 aaKnown RBP25.64■■□□□ 1.69
PMS1-220ENST00000618056 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.63■■□□□ 1.69
PMS1-220ENST00000618056 DDX3XO00571 662 aaKnown RBP eCLIP25.63■■□□□ 1.697e-11■■■□□ 18.9
PMS1-220ENST00000618056 ST8SIA6P61647 398 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 ZNF177Q13360 481 aaPredicted RBP25.63■■□□□ 1.69
PMS1-220ENST00000618056 ARID5BQ14865 1188 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 ARTNQ5T4W7 220 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 HGSNATQ68CP4 663 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 TMPRSS6Q8IU80 811 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 APCDD1Q8J025 514 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 OR2T3Q8NH03 318 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 FAM172AQ8WUF8 416 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 SUN2Q9UH99 717 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 ERVW-1Q9UQF0 538 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 SNX10Q9Y5X0 201 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 NUMA1Q14980 2115 aa25.63■■□□□ 1.69
PMS1-220ENST00000618056 ANKRD62A6NC57 917 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 GYPCP04921 128 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 ADRA1BP35368 520 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 ZNF143P52747 638 aaPredicted RBP25.62■■□□□ 1.69
PMS1-220ENST00000618056 HDAC4P56524 1084 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 ECT2LQ008S8 904 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 SULT2A1Q06520 285 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 CSRP2Q16527 193 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 ARL13BQ3SXY8 428 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 SLC36A4Q6YBV0 504 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 ALG14Q96F25 216 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 MCEEQ96PE7 176 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 ARRDC1-AS1Q9H2J1 176 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 PRSS16Q9NQE7 514 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 SEMA4GQ9NTN9 838 aa25.62■■□□□ 1.69
PMS1-220ENST00000618056 USP36Q9P275 1121 aaKnown RBP25.62■■□□□ 1.69
PMS1-220ENST00000618056 LUC7L2Q9Y383 392 aaKnown RBP25.62■■□□□ 1.69
PMS1-220ENST00000618056 IGHV1OR15-9A0A0B4J2B8 117 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms