RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CIPCQ9C0C6 399 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 C6orf106Q9H6K1 298 aaPredicted RBP8.91□□□□□ -0.98
GPC6-202ENST00000617456 NMUR1Q9HB89 426 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 APOBEC3GQ9HC16 384 aaKnown RBP8.91□□□□□ -0.98
GPC6-202ENST00000617456 PSD3Q9NYI0 1048 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 CHMP5Q9NZZ3 219 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 DNMT3LQ9UJW3 386 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 ANKRD6Q9Y2G4 727 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 SLC27A6Q9Y2P4 619 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 SHROOM3Q8TF72 1996 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 MAST4O15021 2626 aa8.91□□□□□ -0.98
GPC6-202ENST00000617456 MYH10P35580 1976 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 H0Y8X5 98 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 PSMA7O14818 248 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ZSCAN9O15535 394 aaPredicted RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 STC2O76061 302 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 FSBPO95073 299 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 SNUPNO95149 360 aaKnown RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 GNA14O95837 355 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 PENKP01210 267 aaPredicted RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 CCDC175P0C221 793 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 HLA-EP13747 358 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ACO1P21399 889 aaKnown RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 TBXAS1P24557 533 aaPredicted RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 STIP1P31948 543 aaKnown RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 ACSL1P33121 698 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 CHKAP35790 457 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 PRCPP42785 496 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 GRK6P43250 576 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 CCT8P50990 548 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 COPAP53621 1224 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 SEMG2Q02383 582 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ARID5AQ03989 594 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 CETN1Q12798 172 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 SMAD1Q15797 465 aaKnown RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 RAB41Q5JT25 222 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 FYB2Q5VWT5 728 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 PM20D1Q6GTS8 502 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 DBX2Q6ZNG2 339 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ANKS1BQ7Z6G8 1248 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ADAT2Q7Z6V5 191 aaKnown RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 TAX1BP1Q86VP1 789 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 GAS2L3Q86XJ1 694 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 SCML4Q8N228 414 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ANKRD52Q8NB46 1076 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ARMC2Q8NEN0 867 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 C1orf216Q8TAB5 229 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ZNF483Q8TF39 744 aaPredicted RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 SMARCE1Q969G3 411 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 DCLK3Q9C098 648 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 LHX5Q9H2C1 402 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 TM9SF3Q9HD45 589 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 CISHQ9NSE2 258 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
GPC6-202ENST00000617456 ELOVL2Q9NXB9 296 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 FTSJ1Q9UET6 329 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 HMGXB4Q9UGU5 601 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 ARMCX3Q9UH62 379 aaPredicted RBP8.9□□□□□ -0.98
GPC6-202ENST00000617456 RASAL2Q9UJF2 1139 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 NAGPAQ9UK23 515 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 FBXO10Q9UK96 956 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 CLEC4EQ9ULY5 219 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 MAPK8IP1Q9UQF2 711 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 RAI2Q9Y5P3 530 aa8.9□□□□□ -0.98
GPC6-202ENST00000617456 NAV2Q8IVL1 2488 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 CFAP69A5D8W1 941 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 F8VZ95 297 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 CBX4O00257 560 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 ATXN7O15265 892 aaPredicted RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 IGLV3-19P01714 112 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 KLKB1P03952 638 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 TRIM49P0CI25 452 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 TRIM49CP0CI26 452 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 RALAP11233 206 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 TNNT1P13805 278 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 JUPP14923 745 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 CORO1AP31146 461 aaKnown RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 EIF2S3P41091 472 aaKnown RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 SESN3P58005 492 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 EFEMP1Q12805 493 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 PNOCQ13519 176 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 ENPP2Q13822 863 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 STILQ15468 1287 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 PTPRNQ16849 979 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 FNDC3BQ53EP0 1204 aaKnown RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 KCNT1Q5JUK3 1230 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 PRAMEF14Q5SWL7 426 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 ACBD5Q5T8D3 534 aaPredicted RBP8.89□□□□□ -0.99
GPC6-202ENST00000617456 SPOPLQ6IQ16 392 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 SERPINA13PQ6UXR4 307 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 LRRC69Q6ZNQ3 347 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 SCD5Q86SK9 330 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 TMPRSS12Q86WS5 348 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 ZNF366Q8N895 744 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 SLC4A11Q8NBS3 891 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 OR2T3Q8NH03 318 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 DDI1Q8WTU0 396 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 IGSF8Q969P0 613 aa8.89□□□□□ -0.99
GPC6-202ENST00000617456 SLC35C1Q96A29 364 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms