RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 YME1L1Q96TA2 773 aa8□□□□□ -1.13
NEK3-207ENST00000617054 SMOC2Q9H3U7 446 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PLAC1Q9HBJ0 212 aa8□□□□□ -1.13
NEK3-207ENST00000617054 ARHGEF38Q9NXL2 777 aa8□□□□□ -1.13
NEK3-207ENST00000617054 CXXC1Q9P0U4 656 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 NEU3Q9UQ49 428 aa8□□□□□ -1.13
NEK3-207ENST00000617054 DOCK6Q96HP0 2047 aa8□□□□□ -1.13
NEK3-207ENST00000617054 DNAH14Q0VDD8 3507 aa8□□□□□ -1.13
NEK3-207ENST00000617054 A0A087WUV0 522 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 A0A0A0MRY4 1105 aa8□□□□□ -1.13
NEK3-207ENST00000617054 C5orf60A6NFR6 353 aa8□□□□□ -1.13
NEK3-207ENST00000617054 CXorf49A8MYA2 514 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 E9PAM4 449 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TLR5O60602 858 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TIMP1P01033 207 aa8□□□□□ -1.13
NEK3-207ENST00000617054 HAPLN1P10915 354 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 TPH1P17752 444 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PTPN3P26045 913 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TBX4P57082 545 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PDK1Q15118 436 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PRKD1Q15139 912 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 KBTBD12Q3ZCT8 623 aa8□□□□□ -1.13
NEK3-207ENST00000617054 ARTNQ5T4W7 220 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TRMT10BQ6PF06 316 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 ZNF354CQ86Y25 554 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PSTKQ8IV42 348 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 SPATA22Q8NHS9 363 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TMEM169Q96HH4 297 aa8□□□□□ -1.13
NEK3-207ENST00000617054 SPATA13Q96N96 652 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PRMT1Q99873 361 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 FAM129AQ9BZQ8 928 aa8□□□□□ -1.13
NEK3-207ENST00000617054 SLC39A8Q9C0K1 460 aa8□□□□□ -1.13
NEK3-207ENST00000617054 FBXO44Q9H4M3 255 aa8□□□□□ -1.13
NEK3-207ENST00000617054 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8□□□□□ -1.13
NEK3-207ENST00000617054 MARCH2Q9P0N8 246 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TEX264Q9Y6I9 313 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TRANK1O15050 2925 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 TCRBV9S1A1TA0A576 114 aa8□□□□□ -1.13
NEK3-207ENST00000617054 SLC38A8A6NNN8 435 aa8□□□□□ -1.13
NEK3-207ENST00000617054 KCNU1A8MYU2 1149 aa8□□□□□ -1.13
NEK3-207ENST00000617054 RASA4BC9J798 803 aa8□□□□□ -1.13
NEK3-207ENST00000617054 CHADO15335 359 aa8□□□□□ -1.13
NEK3-207ENST00000617054 RASA4O43374 803 aa8□□□□□ -1.13
NEK3-207ENST00000617054 MT-CYBP00156 380 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 IRF1P10914 325 aa8□□□□□ -1.13
NEK3-207ENST00000617054 HSPA8P11142 646 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 KRT15P19012 456 aa8□□□□□ -1.13
NEK3-207ENST00000617054 CD68P34810 354 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 GARSP41250 739 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 SKOR1P84550 965 aa8□□□□□ -1.13
NEK3-207ENST00000617054 XRCC4Q13426 336 aa8□□□□□ -1.13
NEK3-207ENST00000617054 VSIG1Q86XK7 387 aa8□□□□□ -1.13
NEK3-207ENST00000617054 BHMTQ93088 406 aa8□□□□□ -1.13
NEK3-207ENST00000617054 IGSF8Q969P0 613 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PKNOX2Q96KN3 472 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PAIP2Q9BPZ3 127 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 GORASP1Q9BQQ3 440 aa8□□□□□ -1.13
NEK3-207ENST00000617054 ATXN3LQ9H3M9 355 aa8□□□□□ -1.13
NEK3-207ENST00000617054 RCOR3Q9P2K3 495 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 ACTL7AQ9Y615 435 aa8□□□□□ -1.13
NEK3-207ENST00000617054 TMEM120BA0PK00 339 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 PPP1R12AO14974 1030 aaPredicted RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 EIF3HO15372 352 aaKnown RBP eCLIP7.99□□□□□ -1.13
NEK3-207ENST00000617054 GJB3O75712 270 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 MS4A13Q5J8X5 152 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 PPP1R21Q6ZMI0 780 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 RELL1Q8IUW5 271 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 CTAGE3PQ8IX95 158 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 OR52K1Q8NGK4 314 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 SPPL2BQ8TCT7 592 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 TMEM175Q9BSA9 504 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 NACA2Q9H009 215 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 SMPD4Q9NXE4 827 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 PSD3Q9NYI0 1048 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 RRN3Q9NYV6 651 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 ZC3H7BQ9UGR2 993 aaKnown RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 MYO9BQ13459 2157 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 CFAP69A5D8W1 941 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 C2orf78A6NCI8 922 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 ZNF487B1APH4 448 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 H7C4K7 107 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 AGTP01019 485 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 BRAFP15056 766 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 NFKB1P19838 968 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 PAX3P23760 479 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 MGAT1P26572 445 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 MLLT6P55198 1093 aaPredicted RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 STAT4Q14765 748 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 ZSCAN26Q16670 478 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 CNTD1Q8N815 330 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 WBP2Q969T9 261 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 ZNF689Q96CS4 500 aaPredicted RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 SERPINB11Q96P15 392 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 KLHL5Q96PQ7 755 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 PAFAH2Q99487 392 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 CCDC77Q9BR77 488 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 SEZ6LQ9BYH1 1024 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 ROPN1BQ9BZX4 212 aaPredicted RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 RNF38Q9H0F5 515 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms