RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, human

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YTHDF3-208	ENST00000615676	INA	Q16352	499 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	WASHC2D	Q5SRD0	308 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	USP45	Q70EL2	814 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	UNC93A	Q86WB7	457 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MAP4K3	Q8IVH8	894 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CATSPER2	Q96P56	530 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	EVA1B	Q9NVM1	165 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	COPG2	Q9UBF2	871 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM25A	B3EWG3	89 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM25C	B3EWG5	89 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM25G	B3EWG6	89 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	APOC4-APOC2	K7ER74	178 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CD3EAP	O15446	510 aa	Known RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PQBP1	O60828	265 aa	Known RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM20B	O75063	409 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	VAPB	O95292	243 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	LDLR	P01130	860 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	APOC2	P02655	101 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TPH1	P17752	444 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	POLR2E	P19388	210 aa	Known RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TYMP	P19971	482 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	DGKA	P23743	735 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ADORA2A	P29274	412 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FKBP1A	P62942	108 aa	Known RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ZFP1	Q6P2D0	407 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	POMGNT2	Q8NAT1	580 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	UROC1	Q96N76	676 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	LRRC4B	Q9NT99	713 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CDC42BPA	Q5VT25	1732 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ZNF862	O60290	1169 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM58BP	P0C7Q3	252 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	HSMCR30	P0CW71	290 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	UQCRB	P14927	111 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PIK3R1	P27986	724 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MMP13	P45452	471 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MAPK8	P45983	427 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ITGA1	P56199	1179 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PSMC6	P62333	389 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SLC44A4	Q53GD3	710 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FKBP1C	Q5VVH2	108 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CAMKK1	Q8N5S9	505 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	UBE2E3	Q969T4	207 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SLC25A23	Q9BV35	468 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TDRKH	Q9Y2W6	561 aa	Known RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	NBN	O60934	754 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PDE5A	O76074	875 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	NTRK3	Q16288	839 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SETMAR	Q53H47	684 aa	Predicted RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	C11orf88	Q6PI97	169 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	RD3	Q7Z3Z2	195 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TRIM8	Q9BZR9	551 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ROGDI	Q9GZN7	287 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SLITRK2	Q9H156	845 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CXorf56	Q9H5V9	222 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	RERGL	Q9H628	205 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	LMTK2	Q8IWU2	1503 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	8e-6	■■■□□ 17.8
YTHDF3-208	ENST00000615676	SMIM22	K7EJ46	135 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	MRAS	O14807	208 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	ITGB6	P18564	788 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	MLH1	P40692	756 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	FSCN1	Q16658	493 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	CDC73	Q6P1J9	531 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	KYAT3	Q6YP21	454 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	FBXL16	Q8N461	479 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SMAD5	Q99717	465 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	TMEM79	Q9BSE2	394 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SEMA4A	Q9H3S1	761 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	TMEM134	Q9H6X4	195 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	HMX1	Q9NP08	348 aa	Predicted RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SMPD4	Q9NXE4	827 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	OPTC	Q9UBM4	332 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	PRKAG3	Q9UGI9	489 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	TPRKB	Q9Y3C4	175 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	CAT	P04040	527 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	ABCB1	P08183	1280 aa	Predicted RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	CREM	Q03060	361 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	ACVR2B	Q13705	512 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	TSN	Q15631	228 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	PARP6	Q2NL67	630 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	FNDC3B	Q53EP0	1204 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	CCDC149	Q6ZUS6	474 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	KIAA0895	Q8NCT3	520 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SUSD6	Q92537	303 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	AHCYL2	Q96HN2	611 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	IDI2	Q9BXS1	227 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	ENTPD4	Q9Y227	616 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676		H7C0S8	307 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	CSDE1	O75534	798 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	MAPK9	P45984	424 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SERPINH1	P50454	418 aa	Known RBP	13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SOX10	P56693	466 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SLC39A12	Q504Y0	691 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SPDYC	Q5MJ68	293 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	IZUMO2	Q6UXV1	221 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SLC30A10	Q6XR72	485 aa		13.89	□□□□□ -0.19
YTHDF3-208	ENST00000615676	SLC35C1	Q96A29	364 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms