RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 PABPC3Q9H361 631 aaKnown RBP15.31■□□□□ 0.04
PRKN-211ENST00000615065 NDST4Q9H3R1 872 aa15.31■□□□□ 0.04
PRKN-211ENST00000615065 GAREM1Q9H706 876 aa15.31■□□□□ 0.04
PRKN-211ENST00000615065 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRKN-211ENST00000615065 SERGEFQ9UGK8 458 aa15.31■□□□□ 0.04
PRKN-211ENST00000615065 FNDC3AQ9Y2H6 1198 aaKnown RBP15.31■□□□□ 0.04
PRKN-211ENST00000615065 CEP83Q9Y592 693 aa15.31■□□□□ 0.04
PRKN-211ENST00000615065 MID1O15344 667 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 FSBPO95073 299 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 MOCS3O95396 460 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 SRPRAP08240 638 aaKnown RBP15.3■□□□□ 0.04
PRKN-211ENST00000615065 SLC2A3P11169 496 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 PDGFRAP16234 1089 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 ABCB4P21439 1286 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 CCR1P32246 355 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 KRT9P35527 623 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 MATKP42679 507 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 STK19P49842 368 aaPredicted RBP15.3■□□□□ 0.04
PRKN-211ENST00000615065 ECT2LQ008S8 904 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 CENPCQ03188 943 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 ARID5BQ14865 1188 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 HLA-BQ31612 363 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 VWA3BQ502W6 1294 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 LAYNQ6UX15 382 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 ITIH6Q6UXX5 1313 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 MMAAQ8IVH4 418 aaKnown RBP15.3■□□□□ 0.04
PRKN-211ENST00000615065 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
PRKN-211ENST00000615065 KDM1BQ8NB78 822 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 GANCQ8TET4 914 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 RNF34Q969K3 372 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 BIRC7Q96CA5 298 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 NOX5Q96PH1 765 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 TUBGCP2Q9BSJ2 902 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 SGK2Q9HBY8 427 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 TM9SF3Q9HD45 589 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 FBXL12Q9NXK8 326 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 SLC12A6Q9UHW9 1150 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 SLCO3A1Q9UIG8 710 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 KLK13Q9UKR3 277 aa15.3■□□□□ 0.04
PRKN-211ENST00000615065 KNL1Q8NG31 2342 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 EDDM13A0A1B0GTR0 161 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 A0A1W2PP55 124 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 RNASEH1O60930 286 aaKnown RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 DAB1O75553 588 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 CER1O95813 267 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 MZF1P28698 734 aaPredicted RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 GGCXP38435 758 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 IRAK1P51617 712 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 AFF3P51826 1226 aaKnown RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 SLC6A3Q01959 620 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 NME3Q13232 169 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 HNRNPDQ14103 355 aaKnown RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 TRIP6Q15654 476 aaKnown RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 CST6Q15828 149 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 OTUD1Q5VV17 481 aaPredicted RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 RNF219Q5W0B1 726 aaPredicted RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 CXorf57Q6NSI4 855 aaKnown RBP15.29■□□□□ 0.04
PRKN-211ENST00000615065 FBXL22Q6P050 247 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 USP30Q70CQ3 517 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 SLC26A9Q7LBE3 791 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 FAM71AQ8IYT1 594 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 GATA6Q92908 595 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 IGSF8Q969P0 613 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 ORAI3Q9BRQ5 295 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 SYNCQ9H7C4 482 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 NCKAP1Q9Y2A7 1128 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 PCDHB9Q9Y5E1 797 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 FHOD1Q9Y613 1164 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 ASPMQ8IZT6 3477 aa15.29■□□□□ 0.04
PRKN-211ENST00000615065 SPEGQ15772 3267 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 A0A1B0GVM2 712 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 FAM170AA1A519 330 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 TARSL2A2RTX5 802 aaKnown RBP15.28■□□□□ 0.04
PRKN-211ENST00000615065 TCAF2A6NFQ2 919 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 FAM47DPA6NHR8 397 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 PES1O00541 588 aaKnown RBP15.28■□□□□ 0.04
PRKN-211ENST00000615065 IGHV4-34P06331 123 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 ZNF883P0CG24 379 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 VAV1P15498 845 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 CD27P26842 260 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
PRKN-211ENST00000615065 PSMD8P48556 350 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 KCNMA1Q12791 1236 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 RAPGEF1Q13905 1077 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 DRAP1Q14919 205 aaPredicted RBP15.28■□□□□ 0.04
PRKN-211ENST00000615065 KIF19Q2TAC6 998 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 RABGAP1LQ5R372 815 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 TTC39BQ5VTQ0 682 aaPredicted RBP15.28■□□□□ 0.04
PRKN-211ENST00000615065 SMYD5Q6GMV2 418 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 NCEH1Q6PIU2 408 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 IL27RAQ6UWB1 636 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 STK40Q8N2I9 435 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 CHCHD4Q8N4Q1 142 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 PTPRN2Q92932 1015 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 RPRD1AQ96P16 312 aaPredicted RBP15.28■□□□□ 0.04
PRKN-211ENST00000615065 FAM129BQ96TA1 746 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 NUP62CLQ9H1M0 184 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 NEUROG2Q9H2A3 272 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 TM7SF3Q9NS93 570 aa15.28■□□□□ 0.04
PRKN-211ENST00000615065 VANGL2Q9ULK5 521 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms