RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 APOC2P02655 101 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 MBL2P11226 248 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 KRT10P13645 584 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 ZFXP17010 805 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 TGM2P21980 687 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 TARSP26639 723 aaKnown RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 CCR2P41597 374 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 FNTAP49354 379 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 ADCY2Q08462 1091 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 C2orf54Q08AI8 447 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 MMRN1Q13201 1228 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 DPYSQ14117 519 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 ARHGAP15Q53QZ3 475 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 TXNDC8Q6A555 127 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 DRICH1Q6PGQ1 229 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 RFX8Q6ZV50 586 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 RFX6Q8HWS3 928 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 PYROXD2Q8N2H3 581 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 PQLC3Q8N755 202 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 PRELID2Q8N945 189 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 LRRN4CLQ8ND94 238 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 MYRIPQ8NFW9 859 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 PCDH19Q8TAB3 1148 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 RUNDC3BQ96NL0 473 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 KXD1Q9BQD3 176 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 HEMGNQ9BXL5 484 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 AP1M1Q9BXS5 423 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 RNF38Q9H0F5 515 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 SLITRK6Q9H5Y7 841 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 TRPC7Q9HCX4 862 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 ARHGEF4Q9NR80 690 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 CWC15Q9P013 229 aaKnown RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 OR12D3Q9UGF7 316 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 CDV3Q9UKY7 258 aaKnown RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 NEU3Q9UQ49 428 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 HS3ST4Q9Y661 456 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 KIF26AQ9ULI4 1882 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 COL4A2P08572 1712 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 CHD5Q8TDI0 1954 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 CHD6Q8TD26 2715 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 KANSL1LA0AUZ9 987 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 FAM170BA6NMN3 283 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 FAM72CH0Y354 149 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 APOL1O14791 398 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 FGF10O15520 208 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 LAMTOR5O43504 91 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 CST8O60676 142 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 STC2O76061 302 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 LRIG2O94898 1065 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 ADRB1P08588 477 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 GOT1P17174 413 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 HDCP19113 662 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 CHRNA3P32297 505 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 HARS2P49590 506 aaKnown RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 MLLT6P55198 1093 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 TPI1P60174 286 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 MLF2Q15773 248 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 CCNG2Q16589 344 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 SLC5A9Q2M3M2 681 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 ARTNQ5T4W7 220 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 FAM72AQ5TYM5 149 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 PIK3R6Q5UE93 754 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 KAZNQ674X7 775 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 FAM72DQ6L9T8 149 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 FAM72BQ86X60 149 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 DDX42Q86XP3 938 aaKnown RBP eCLIP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 ZNF683Q8IZ20 524 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 PLD5Q8N7P1 536 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 ARL14EPQ8N8R7 260 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 NOA1Q8NC60 698 aaKnown RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 ZBTB44Q8NCP5 570 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 ITFG1Q8TB96 612 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 SLC22A12Q96S37 553 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 PRMT1Q99873 361 aaKnown RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 MAK16Q9BXY0 300 aaKnown RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 DCLK3Q9C098 648 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 TASP1Q9H6P5 420 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 LRRC19Q9H756 370 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 PPARGC1AQ9UBK2 798 aaKnown RBP11.78□□□□□ -0.52
SLIRP-212ENST00000613856 STOML2Q9UJZ1 356 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 ARHGAP26Q9UNA1 814 aa11.78□□□□□ -0.52
SLIRP-212ENST00000613856 IGLV3-10A0A075B6K4 115 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 DCLK1O15075 740 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 CTIFO43310 598 aaKnown RBP11.77□□□□□ -0.53
SLIRP-212ENST00000613856 CREB3O43889 395 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 ACSL4O60488 711 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 LILRB5O75023 590 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 MOCS2O96007 188 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-212ENST00000613856 CKMP06732 381 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 HMBSP08397 361 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 TCF3P15923 654 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 FSHRP23945 695 aa11.77□□□□□ -0.53
SLIRP-212ENST00000613856 WEE1P30291 646 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms