RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 GPR161Q8N6U8 529 aaKnown RBP13.07□□□□□ -0.32
CSTF1-208ENST00000613138 CCDC185Q8N715 623 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 MSANTD4Q8NCY6 345 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
CSTF1-208ENST00000613138 MRGPRX3Q96LB0 322 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 MCEEQ96PE7 176 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 DDX50Q9BQ39 737 aaKnown RBP13.07□□□□□ -0.32
CSTF1-208ENST00000613138 TMEM245Q9H330 911 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 AIPL1Q9NZN9 384 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 SLCO3A1Q9UIG8 710 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 GMEB2Q9UKD1 530 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 USP18Q9UMW8 372 aa13.07□□□□□ -0.32
CSTF1-208ENST00000613138 ATXN2Q99700 1313 aaKnown RBP13.07□□□□□ -0.32
CSTF1-208ENST00000613138 KNL1Q8NG31 2342 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 SPTBN2O15020 2390 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 TTC34A8MYJ7 566 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 CCP110O43303 1012 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 GDF9O60383 454 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 ALDH1A2O94788 518 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 GYPCP04921 128 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 SLC2A3P11169 496 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 KRT3P12035 628 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 VAV1P15498 845 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 POLR2EP19388 210 aaKnown RBP13.06□□□□□ -0.32
CSTF1-208ENST00000613138 RDXP35241 583 aaKnown RBP13.06□□□□□ -0.32
CSTF1-208ENST00000613138 PTGER3P43115 390 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 HDAC4P56524 1084 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 TPM4P67936 248 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 KLHL30Q0D2K2 578 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 PLEKHG6Q3KR16 790 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 USP39Q53GS9 565 aaKnown RBP13.06□□□□□ -0.32
CSTF1-208ENST00000613138 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 TFAP2DQ7Z6R9 452 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 PYROXD2Q8N2H3 581 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 WFIKKN2Q8TEU8 576 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 FAM172AQ8WUF8 416 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 UCMAQ8WVF2 138 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 SELENOOQ9BVL4 669 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 SLC12A6Q9UHW9 1150 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 MYO6Q9UM54 1294 aa13.06□□□□□ -0.32
CSTF1-208ENST00000613138 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 TYW5A2RUC4 315 aaKnown RBP13.05□□□□□ -0.32
CSTF1-208ENST00000613138 SIGLEC16A6NMB1 481 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 PATE3B3GLJ2 98 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 E9PAM4 449 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 SNAP91O60641 907 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 ENDOD1O94919 500 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 EPN2O95208 641 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 CALB1P05937 261 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 RETP07949 1114 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 DLDP09622 509 aaKnown RBP13.05□□□□□ -0.32
CSTF1-208ENST00000613138 GPD1P21695 349 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 GLDCP23378 1020 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 CASP14P31944 242 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 PRKCIP41743 596 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 DHPSP49366 369 aaPredicted RBP13.05□□□□□ -0.32
CSTF1-208ENST00000613138 GSCP56915 257 aaPredicted RBP13.05□□□□□ -0.32
CSTF1-208ENST00000613138 CREB5Q02930 508 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
CSTF1-208ENST00000613138 EIF4HQ15056 248 aaKnown RBP13.05□□□□□ -0.32
CSTF1-208ENST00000613138 BRMS1LQ5PSV4 323 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 PPP1R15BQ5SWA1 713 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 DNAJC24Q6P3W2 148 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 FAM124AQ86V42 546 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 TMPRSS6Q8IU80 811 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 C3orf20Q8ND61 904 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 ALG14Q96F25 216 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 ZC3H10Q96K80 434 aaKnown RBP13.05□□□□□ -0.32
CSTF1-208ENST00000613138 PRSS16Q9NQE7 514 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 FSCN3Q9NQT6 498 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 SEMA4GQ9NTN9 838 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 NDFIP2Q9NV92 336 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 ACTL7AQ9Y615 435 aa13.05□□□□□ -0.32
CSTF1-208ENST00000613138 A0A0D9SEW6 157 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 A0A1B0GVM2 712 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 TCAF2A6NFQ2 919 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 SYNCRIPO60506 623 aaKnown RBP13.04□□□□□ -0.32
CSTF1-208ENST00000613138 SIN3BO75182 1162 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 FTLP02792 175 aaPredicted RBP13.04□□□□□ -0.32
CSTF1-208ENST00000613138 SDC4P31431 198 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 METAP1P53582 386 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 ZNF252P-AS1Q0IIN9 211 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 C5orf22Q49AR2 442 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
CSTF1-208ENST00000613138 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 RNF219Q5W0B1 726 aaPredicted RBP13.04□□□□□ -0.32
CSTF1-208ENST00000613138 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
CSTF1-208ENST00000613138 SLC41A1Q8IVJ1 513 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 OR7D4Q8NG98 312 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 CENPIQ92674 756 aaPredicted RBP13.04□□□□□ -0.32
CSTF1-208ENST00000613138 PSMB7Q99436 277 aa13.04□□□□□ -0.32
CSTF1-208ENST00000613138 PRDM16Q9HAZ2 1276 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms