RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MEIOBQ8N635 442 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SDR42E1Q8WUS8 393 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 KCTD15Q96SI1 283 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 KLHL28Q9NXS3 571 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 AASSQ9UDR5 926 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 KIAA1257Q9ULG3 409 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SLC2A3P11169 496 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 GSTM5P46439 218 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 KPNA1P52294 538 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 HIST2H2ACQ16777 129 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 HIST2H2AA3Q6FI13 130 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 FAM43BQ6ZT52 329 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 PID1Q7Z2X4 250 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 OSBP2Q969R2 916 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 ZNF669Q96BR6 464 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 FAM193BQ96PV7 902 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 SMURF2Q9HAU4 748 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 NMRAL1Q9HBL8 299 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 XDHP47989 1333 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SULT1B1O43704 296 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 CAMK1Q14012 370 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 ACAP1Q15027 740 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 ACCSLQ4AC99 568 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SNX32Q86XE0 403 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 NSMCE3Q96MG7 304 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 YME1L1Q96TA2 773 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 PGK1P00558 417 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 MYL9P24844 172 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 CLEC16AQ2KHT3 1053 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 RNF145Q96MT1 663 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 SENP6Q9GZR1 1112 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 KPNA5O15131 536 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 FDX1P10109 184 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 FGFR2P21802 821 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 PPIBP23284 216 aaKnown RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 PPP3CCP48454 512 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 PSMC5P62195 406 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 N4BP2L1Q5TBK1 243 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 RBAKQ9NYW8 714 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 UBQLN1Q9UMX0 589 aaKnown RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 EVPLQ92817 2033 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 ASTN2O75129 1339 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 EIF2S3P41091 472 aaKnown RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 USF2Q15853 346 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 DENND2DQ9H6A0 471 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 LEF1Q9UJU2 399 aaPredicted RBP8.93□□□□□ -0.98
TTC28-208ENST00000612946 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
TTC28-208ENST00000612946 IGSF9BQ9UPX0 1349 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CLTBP09497 229 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CLNKQ7Z7G1 428 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 IZUMO1Q8IYV9 350 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 OR8H3Q8N146 312 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 LRRC47Q8N1G4 583 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 CNTD1Q8N815 330 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 NEK6Q9HC98 313 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 RNF112Q9ULX5 631 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 POLIQ9UNA4 740 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 RGS10O43665 173 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 BMP3P12645 472 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 S100GP29377 79 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 RPS8P62241 208 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 BTN3A2P78410 334 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ZNF671Q8TAW3 534 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ZNF512BQ96KM6 892 aaPredicted RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 GMPPBQ9Y5P6 360 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 LINC00854A0A1B0GVQ3 168 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 GPIP06744 558 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CAPZA2P47755 286 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 AMPD2Q01433 879 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CDK18Q07002 472 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 SNRNP35Q16560 246 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 TYW3Q6IPR3 259 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 KCNN2Q9H2S1 579 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ZFYVE28Q9HCC9 887 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ZNF608Q9ULD9 1512 aaPredicted RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 USP6P35125 1406 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 SETD1AO15047 1707 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 MYO3AQ8NEV4 1616 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 C5orf60A6NFR6 353 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 HACD1B0YJ81 288 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 PTGES3LE9PB15 166 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 ZNF701M0R085 212 aaPredicted RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 GSC2O15499 205 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 PSME3P61289 254 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 STRIP1Q5VSL9 837 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 RASGRP4Q8TDF6 673 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 TRMOQ9BU70 441 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CHKBQ9Y259 395 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 TNPO3Q9Y5L0 923 aaKnown RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 C2orf74A8MZ97 194 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CST8O60676 142 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 CLPXO76031 633 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 KCNH1O95259 989 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 P2RY8Q86VZ1 359 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 IPCEF1Q8WWN9 437 aaPredicted RBP8.92□□□□□ -0.98
TTC28-208ENST00000612946 C7orf26Q96N11 449 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 SEMA4AQ9H3S1 761 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 NDFIP2Q9NV92 336 aa8.92□□□□□ -0.98
TTC28-208ENST00000612946 DNAJC28Q9NX36 388 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms