RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 CLEC18BQ6UXF7 455 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 RBM44Q6ZP01 1051 aaKnown RBP10.69□□□□□ -0.7
SSX3-204ENST00000612497 PTRH1Q86Y79 214 aaKnown RBP10.69□□□□□ -0.7
SSX3-204ENST00000612497 FAM26EQ8N5C1 309 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 CLEC18CQ8NCF0 446 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 WDR36Q8NI36 951 aaKnown RBP10.69□□□□□ -0.7
SSX3-204ENST00000612497 WFDC5Q8TCV5 224 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 CYFIP2Q96F07 1278 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 MYO19Q96H55 970 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 EPSTI1Q96J88 318 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 SLC25A18Q9H1K4 315 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 VRTNQ9H8Y1 702 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 USP29Q9HBJ7 922 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 PNPLA8Q9NP80 782 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 KLHL11Q9NVR0 708 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 NLGN3Q9NZ94 848 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 ARHGAP20Q9P2F6 1191 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 CCDC39Q9UFE4 941 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 CYTH4Q9UIA0 394 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 SRPK3Q9UPE1 567 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 CA5BQ9Y2D0 317 aa10.69□□□□□ -0.7
SSX3-204ENST00000612497 COL27A1Q8IZC6 1860 aaPredicted RBP10.69□□□□□ -0.7
SSX3-204ENST00000612497 ZFC3H1O60293 1989 aaKnown RBP10.68□□□□□ -0.7
SSX3-204ENST00000612497 UBE4BO95155 1302 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 LY6G6EA0A0G2JKS1 128 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 TARSL2A2RTX5 802 aaKnown RBP10.68□□□□□ -0.7
SSX3-204ENST00000612497 TTC34A8MYJ7 566 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 PRAMEF26H0Y7S4 382 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 STX6O43752 255 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 TBL1XO60907 577 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 PIAS2O75928 621 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 ADH1BP00325 375 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 IL1BP01584 269 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 GIMD1P0DJR0 217 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 NUDT1P36639 197 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 CCR10P46092 362 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 SGSHP51688 502 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 FOXK1P85037 733 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 KCNMA1Q12791 1236 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 NCOA4Q13772 614 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 TGIF1Q15583 401 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 TRIP4Q15650 581 aaPredicted RBP10.68□□□□□ -0.7
SSX3-204ENST00000612497 TBR1Q16650 682 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 CDKN3Q16667 212 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 SKIDA1Q1XH10 827 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 ADGRF1Q5T601 910 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 RRAGBQ5VZM2 374 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 UNC93AQ86WB7 457 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 STK40Q8N2I9 435 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 ARHGAP18Q8N392 663 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
SSX3-204ENST00000612497 EPN3Q9H201 632 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 CAAP1Q9H8G2 361 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 USP3Q9Y6I4 520 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 U3KQA8 63 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
SSX3-204ENST00000612497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.67□□□□□ -0.7
SSX3-204ENST00000612497 EDDM13A0A1B0GTR0 161 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 FRMD3A2A2Y4 597 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 K7ESM1 405 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 CLIC2O15247 247 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 RTN2O75298 545 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 NEBLO76041 1014 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 ASLP04424 464 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 ITGA2BP08514 1039 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 SLC5A2P31639 672 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 HOXD13P35453 343 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 CSKP41240 450 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 CASP4P49662 377 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 YWHAGP61981 247 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSX3-204ENST00000612497 ZNF177Q13360 481 aaPredicted RBP10.67□□□□□ -0.7
SSX3-204ENST00000612497 ARID5BQ14865 1188 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 SETMARQ53H47 684 aaPredicted RBP10.67□□□□□ -0.7
SSX3-204ENST00000612497 CRTC1Q6UUV9 634 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 EFL1Q7Z2Z2 1120 aaKnown RBP10.67□□□□□ -0.7
SSX3-204ENST00000612497 C14orf80Q86SX3 495 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 JAMLQ86YT9 394 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 CCDC65Q8IXS2 484 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 ZSCAN1Q8NBB4 408 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 XXYLT1Q8NBI6 393 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 TTC17Q96AE7 1141 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 MRGPRX3Q96LB0 322 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 FAM129BQ96TA1 746 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 MYOCQ99972 504 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 DUSP23Q9BVJ7 150 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 CALN1Q9BXU9 219 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 AGPAT3Q9NRZ7 376 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 GEMIN8Q9NWZ8 242 aaKnown RBP10.67□□□□□ -0.7
SSX3-204ENST00000612497 STIM2Q9P246 746 aa10.67□□□□□ -0.7
SSX3-204ENST00000612497 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 H3BQV1 296 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 SCAMP1O15126 338 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 SLC31A1O15431 190 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 NOBOXO60393 691 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 BMP15O95972 392 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 SLFN14P0C7P3 912 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 MZF1P28698 734 aaPredicted RBP10.66□□□□□ -0.7
SSX3-204ENST00000612497 DRD3P35462 400 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 SGSM1Q2NKQ1 1148 aa10.66□□□□□ -0.7
SSX3-204ENST00000612497 ZNF542PQ5EBM4 170 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms