RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 MYO19Q96H55 970 aa13.83□□□□□ -0.2
HMGB1P24-201ENST00000611897 NEUROG2Q9H2A3 272 aa13.83□□□□□ -0.2
HMGB1P24-201ENST00000611897 COX16Q9P0S2 106 aa13.83□□□□□ -0.2
HMGB1P24-201ENST00000611897 KIAA1522Q9P206 1035 aaPredicted RBP13.83□□□□□ -0.2
HMGB1P24-201ENST00000611897 TJP2Q9UDY2 1190 aa13.83□□□□□ -0.2
HMGB1P24-201ENST00000611897 LAMA5O15230 3695 aa13.83□□□□□ -0.2
HMGB1P24-201ENST00000611897 A0A1W2PPC4 97 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 ITGAVP06756 1048 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 SLC8A1P32418 973 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 MCCD1P59942 119 aaPredicted RBP13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 RACK1P63244 317 aaKnown RBP13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 SFSWAPQ12872 951 aaKnown RBP13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 STILQ15468 1287 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 ZC3H12AQ5D1E8 599 aaKnown RBP13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 MS4A13Q5J8X5 152 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 DENND1BQ6P3S1 775 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 USP30Q70CQ3 517 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 STK40Q8N2I9 435 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 OR14C36Q8NHC7 312 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 TTC17Q96AE7 1141 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 MRGPRX3Q96LB0 322 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 HSFY1Q96LI6 401 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 ORAI3Q9BRQ5 295 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 OSGEPQ9NPF4 335 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 HOOK1Q9UJC3 728 aaKnown RBP13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 CTNND2Q9UQB3 1225 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 TLR6Q9Y2C9 796 aa13.82□□□□□ -0.2
HMGB1P24-201ENST00000611897 BPTFQ12830 3046 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 A0A1B0GTQ1 180 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 EDDM13A0A1B0GTR0 161 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 PLK4O00444 970 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 VILLO15195 856 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 PCDHGA12O60330 932 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 IL1BP01584 269 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 WNT1P04628 370 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 FYNP06241 537 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 VAV1P15498 845 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 CD44P16070 742 aaKnown RBP13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 PDGFRAP16234 1089 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 TACR2P21452 398 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 ECT2LQ008S8 904 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 DNAJC3Q13217 504 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 KCNJ12Q14500 433 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 C9orf64Q5T6V5 341 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 SYPL2Q5VXT5 272 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 DBX2Q6ZNG2 339 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 APCDD1Q8J025 514 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 AADATQ8N5Z0 425 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 OR2T34Q8NGX1 318 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 SERAC1Q96JX3 654 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 CNDP2Q96KP4 475 aaKnown RBP13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 LMLNQ96KR4 655 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 ELF4Q99607 663 aaPredicted RBP13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 FAM204AQ9H8W3 233 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 SLCO3A1Q9UIG8 710 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 SCML1Q9UN30 329 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 DOCK9Q9BZ29 2069 aa13.81□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3DA0A087WVF3 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3IA0A087WXS9 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3EA0A087X179 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3KA0A087X1G2 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3FA6NER0 549 aaPredicted RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 EIF4E1BA6NMX2 242 aaKnown RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3LB9A6J9 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 E5RJQ4 531 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 F5H5T6 163 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 BIN1O00499 593 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 ENC1O14682 589 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 WNT9AO14904 365 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 SART1O43290 800 aaKnown RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 THAP12O43422 761 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 BNIP3LO60238 219 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3HP0C7X1 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 CD38P28907 300 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 MAT2AP31153 395 aaKnown RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 ADPRHP54922 357 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 STX17P56962 302 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 PPP2CBP62714 309 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 PPP2CAP67775 309 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 PITX1P78337 314 aaPredicted RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 COBLL1Q53SF7 1204 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3GQ6DHY5 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3CQ6IPX1 549 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 SND1Q7KZF4 910 aaKnown RBP eCLIP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 TBC1D3Q8IZP1 549 aaPredicted RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 EID2Q8N6I1 236 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 NELFBQ8WX92 580 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 RNF34Q969K3 372 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 CRELD1Q96HD1 420 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 GTPBP4Q9BZE4 634 aaKnown RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 IRX2Q9BZI1 471 aaPredicted RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 INTS2Q9H0H0 1204 aaKnown RBP13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 EBF2Q9HAK2 575 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 GDF3Q9NR23 364 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 MAN1B1Q9UKM7 699 aa13.8□□□□□ -0.2
HMGB1P24-201ENST00000611897 FZD4Q9ULV1 537 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms