RNA–Protein interactions for RNA: ENST00000611716.4

PCSK6-214, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCSK6, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-214ENST00000611716 GRIA4P48058 902 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 RP9Q8TA86 221 aaKnown RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 LRTOMTQ8WZ04 291 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 RNF145Q96MT1 663 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 EIF2AQ9BY44 585 aaKnown RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 FAM49AQ9H0Q0 323 aaPredicted RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 COQ10BQ9H8M1 238 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 SIGLEC16A6NMB1 481 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 PSMD12O00232 456 aaPredicted RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 AMHP03971 560 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 WRAP73Q9P2S5 460 aaPredicted RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 SLC17A6Q9P2U8 582 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 PRPF19Q9UMS4 504 aaKnown RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 ATP8B3O60423 1300 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 CSH1P0DML2 217 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 CSH2P0DML3 217 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 EIF4BP23588 611 aaKnown RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 DGCR6Q14129 220 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 HERC6Q8IVU3 1022 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 IL31RAQ8NI17 732 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 SKA2Q8WVK7 121 aaPredicted RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 HTR3CQ8WXA8 447 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 APBA2Q99767 749 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 CXorf21Q9HAI6 301 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 XPNPEP1Q9NQW7 623 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 GPRC5DQ9NZD1 345 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 BAZ2AQ9UIF9 1905 aaKnown RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 MYO1GB0I1T2 1018 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 SLCO1B7G3V0H7 640 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 STX16-NPEPL1H3BU86 382 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 J3QRK9 145 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 TRIM38O00635 465 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 LRCH4O75427 683 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 PMPCBO75439 489 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 XRCC1P18887 633 aaPredicted RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 HMGCS2P54868 508 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 KCNK10P57789 538 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 NFYCQ13952 458 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 UGCGQ16739 394 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 RSBN1Q5VWQ0 802 aaPredicted RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 PHTF2Q8N3S3 785 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 ZNF781Q8N8C0 355 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 AGBL3Q8NEM8 1001 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 BPIFB6Q8NFQ5 453 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 FAM151AQ8WW52 585 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 FBXL8Q96CD0 374 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 LRRC39Q96DD0 335 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 GPATCH1Q9BRR8 931 aaKnown RBP20.2■□□□□ 0.82
PCSK6-214ENST00000611716 VANGL2Q9ULK5 521 aa20.2■□□□□ 0.82
PCSK6-214ENST00000611716 OGTO15294 1046 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 MAGP20916 626 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 TRAF7Q6Q0C0 670 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 XKR5Q6UX68 686 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 SLC51AQ86UW1 340 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 TMEM39BQ9GZU3 492 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 DEFB129Q9H1M3 183 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 ZNF358Q9NW07 568 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 MYCP01106 439 aaPredicted RBP20.19■□□□□ 0.82
PCSK6-214ENST00000611716 CKMT2P17540 419 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 TSPAN8P19075 237 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 CCNA2P20248 432 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 RPS12P25398 132 aaKnown RBP20.19■□□□□ 0.82
PCSK6-214ENST00000611716 PTPN7P35236 360 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 NUMBP49757 651 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 SPIRE1Q08AE8 756 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 ARMCX2Q7L311 632 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 ZBTB18Q99592 522 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 C1orf50Q9BV19 199 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 RPAP3Q9H6T3 665 aaPredicted RBP20.19■□□□□ 0.82
PCSK6-214ENST00000611716 KIF17Q9P2E2 1029 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 MATN2O00339 956 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 TRIM25Q14258 630 aaKnown RBP20.19■□□□□ 0.82
PCSK6-214ENST00000611716 TBC1D25Q3MII6 688 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 SAMD4BQ5PRF9 694 aaKnown RBP20.19■□□□□ 0.82
PCSK6-214ENST00000611716 ATF7IP2Q5U623 682 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 C9orf131Q5VYM1 1079 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 CDHR3Q6ZTQ4 885 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 SNX31Q8N9S9 440 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 PLEKHO2Q8TD55 490 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 RNF157Q96PX1 679 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 CDH19Q9H159 772 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 STK39Q9UEW8 545 aa20.19■□□□□ 0.82
PCSK6-214ENST00000611716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.19■□□□□ 0.82
PCSK6-214ENST00000611716 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 E5RJQ4 531 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 ALOX15P16050 662 aaPredicted RBP20.18■□□□□ 0.82
PCSK6-214ENST00000611716 TSHRP16473 764 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 PSMB9P28065 219 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 THOP1P52888 689 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 POLD3Q15054 466 aaPredicted RBP20.18■□□□□ 0.82
PCSK6-214ENST00000611716 GALNT18Q6P9A2 607 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 GK5Q6ZS86 529 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 RBM12BQ8IXT5 1001 aaKnown RBP20.18■□□□□ 0.82
PCSK6-214ENST00000611716 FNIP1Q8TF40 1166 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 DGKBQ9Y6T7 804 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
PCSK6-214ENST00000611716 MOCS2O96007 188 aaPredicted RBP20.18■□□□□ 0.82
PCSK6-214ENST00000611716 PTP4A2Q12974 167 aa20.18■□□□□ 0.82
PCSK6-214ENST00000611716 ADGRE1Q14246 886 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms