RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 RAB7BQ96AH8 199 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 CCDC127Q96BQ5 260 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 KCNK16Q96T55 309 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 ULBP1Q9BZM6 244 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 PABPC3Q9H361 631 aaKnown RBP7.42□□□□□ -1.22
CBWD1-219ENST00000611457 LMAN1LQ9HAT1 526 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 POLMQ9NP87 494 aaPredicted RBP7.42□□□□□ -1.22
CBWD1-219ENST00000611457 ABCB8Q9NUT2 735 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 CFAP97Q9P2B7 532 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 DNAJC12Q9UKB3 198 aa7.42□□□□□ -1.22
CBWD1-219ENST00000611457 TSPAN3O60637 253 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 KAT7O95251 611 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 CPP00450 1065 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 ASGR2P07307 311 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 KRT19P08727 400 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 ARSAP15289 507 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 RDXP35241 583 aaKnown RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 SLC11A2P49281 568 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 MNAT1P51948 309 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 ZNF143P52747 638 aaPredicted RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 MAP3K7CLP57077 242 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 CRY1Q16526 586 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 RSRC2Q7L4I2 434 aaKnown RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 AOPEPQ8N6M6 819 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 ARL14EPQ8N8R7 260 aaPredicted RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 TACO1Q9BSH4 297 aaKnown RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 PARD6BQ9BYG5 372 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 MARCH2Q9P0N8 246 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 DNPEPQ9ULA0 475 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 EDDM13A0A1B0GTR0 161 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 HCRTO43612 131 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 PCDHGA12O60330 932 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 RHOQP17081 205 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 SATB1Q01826 763 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 CYP27A1Q02318 531 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 NSUN2Q08J23 767 aaKnown RBP eCLIP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 PTPN20Q4JDL3 420 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 RABGAP1LQ5R372 815 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 IER5LQ5T953 404 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 HNRNPLLQ8WVV9 542 aaKnown RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 SCARF2Q96GP6 870 aaPredicted RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 OSBPL1AQ9BXW6 950 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 BRD8Q9H0E9 1235 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 MAGEH1Q9H213 219 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 CCSER2Q9H7U1 834 aa7.41□□□□□ -1.22
CBWD1-219ENST00000611457 SMG5Q9UPR3 1016 aaKnown RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 MTF2Q9Y483 593 aaPredicted RBP7.41□□□□□ -1.22
CBWD1-219ENST00000611457 CLDN5O00501 218 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 PLRG1O43660 514 aaKnown RBP7.4□□□□□ -1.22
CBWD1-219ENST00000611457 TUBBP07437 444 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 VIPR2P41587 438 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 CLCNKAP51800 687 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 ZBED6P86452 979 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 SIM2Q14190 667 aaPredicted RBP7.4□□□□□ -1.22
CBWD1-219ENST00000611457 CLUL1Q15846 466 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 NOP9Q86U38 636 aaKnown RBP7.4□□□□□ -1.22
CBWD1-219ENST00000611457 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 NKD2Q969F2 451 aaPredicted RBP7.4□□□□□ -1.22
CBWD1-219ENST00000611457 HEBP1Q9NRV9 189 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 SUSD2Q9UGT4 822 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 STAP1Q9ULZ2 295 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 PCDHB4Q9Y5E5 795 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 SCINQ9Y6U3 715 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 IGHV1OR15-9A0A0B4J2B8 117 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 YJEFN3A6XGL0 299 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 E7ENQ6 273 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 TULP3O75386 442 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 PMLP29590 882 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 PGFP49763 221 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 LMAN2Q12907 356 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 SQSTM1Q13501 440 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 TMEM52BQ4KMG9 183 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 ZFYVE27Q5T4F4 411 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 TAC4Q86UU9 113 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 C12orf40Q86WS4 652 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 BBS7Q8IWZ6 715 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 LZTR1Q8N653 840 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 SCAMP5Q8TAC9 235 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 UCMAQ8WVF2 138 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 MAML1Q92585 1016 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 RUBCNQ92622 972 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 FOXJ1Q92949 421 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 ECHDC3Q96DC8 303 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 HEXIM2Q96MH2 286 aaKnown RBP7.4□□□□□ -1.22
CBWD1-219ENST00000611457 TSGA13Q96PP4 275 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 MMS19Q96T76 1030 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 FZD10Q9ULW2 581 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 SUFUQ9UMX1 484 aa7.4□□□□□ -1.22
CBWD1-219ENST00000611457 MAP2K7O14733 419 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 PJA2O43164 708 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 ARHGAP6O43182 974 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 RTN2O75298 545 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 SERPINF2P08697 491 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 MBL2P11226 248 aaPredicted RBP7.4□□□□□ -1.23
CBWD1-219ENST00000611457 HNRNPA1L2Q32P51 320 aaKnown RBP7.4□□□□□ -1.23
CBWD1-219ENST00000611457 PARP15Q460N3 678 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 FAM183BPQ6ZVS7 135 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 ZNF765Q7L2R6 523 aa7.4□□□□□ -1.23
CBWD1-219ENST00000611457 SMYD4Q8IYR2 804 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms