RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ANKLE1Q8NAG6 615 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 CD99L2Q8TCZ2 262 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 HAPLN3Q96S86 360 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 ZCWPW1Q9H0M4 648 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 SMOC2Q9H3U7 446 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 CFAP73A6NFT4 308 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 ERI2A8K979 691 aaKnown RBP28.74■■■□□ 2.19
CSPG5-205ENST00000610462 OAZ2O95190 189 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 ALDH3A1P30838 453 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 CD68P34810 354 aaPredicted RBP28.74■■■□□ 2.19
CSPG5-205ENST00000610462 ZBTB17Q13105 803 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 SLC43A3Q8NBI5 491 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 OR52K1Q8NGK4 314 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 ZNF398Q8TD17 642 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 AGAP3Q96P47 875 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 TROVE2P10155 538 aaKnown RBP eCLIP28.73■■■□□ 2.19
CSPG5-205ENST00000610462 COG7P83436 770 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 SETDB1Q15047 1291 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 KCTD11Q693B1 232 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 SCD5Q86SK9 330 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 DCP1BQ8IZD4 617 aaKnown RBP28.73■■■□□ 2.19
CSPG5-205ENST00000610462 TSSK1BQ9BXA7 367 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 KANSL3Q9P2N6 904 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 NEU3Q9UQ49 428 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 DCTN3O75935 186 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 POLBP06746 335 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 OR1G1P47890 313 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 ZNF33AQ06730 810 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 SPANXN3Q5MJ09 141 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 REM2Q8IYK8 340 aaPredicted RBP28.73■■■□□ 2.19
CSPG5-205ENST00000610462 RAET1EQ8TD07 263 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 DPF3Q92784 378 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 SIK2Q9H0K1 926 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 CASS4Q9NQ75 786 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 KLC4Q9NSK0 619 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 TBC1D13Q9NVG8 400 aa28.73■■■□□ 2.19
CSPG5-205ENST00000610462 SRGAP2BP0DMP2 458 aa28.72■■■□□ 2.19
CSPG5-205ENST00000610462 NEFHP12036 1026 aa28.72■■■□□ 2.19
CSPG5-205ENST00000610462 HTR7P34969 479 aa28.72■■■□□ 2.19
CSPG5-205ENST00000610462 RWDD4Q6NW29 188 aaKnown RBP28.72■■■□□ 2.19
CSPG5-205ENST00000610462 SCN4BQ8IWT1 228 aa28.72■■■□□ 2.19
CSPG5-205ENST00000610462 SLC13A1Q9BZW2 595 aa28.72■■■□□ 2.19
CSPG5-205ENST00000610462 NPHS2Q9NP85 383 aa28.72■■■□□ 2.19
CSPG5-205ENST00000610462 CHKBQ9Y259 395 aa28.72■■■□□ 2.19
CSPG5-205ENST00000610462 A0A1W2PQ45 241 aaPredicted RBP28.71■■■□□ 2.19
CSPG5-205ENST00000610462 A0A1W2PQY0 241 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 BGNP21810 368 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 CCR1P32246 355 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 CRHR1P34998 444 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 PGFP49763 221 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 OLIG2Q13516 323 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 ZNF449Q6P9G9 518 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 PACS1Q6VY07 963 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 PXYLP1Q8TE99 480 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 CASP10Q92851 521 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 CELF6Q96J87 481 aaKnown RBP28.71■■■□□ 2.19
CSPG5-205ENST00000610462 TEKT5Q96M29 485 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 MLPHQ9BV36 600 aaPredicted RBP28.71■■■□□ 2.19
CSPG5-205ENST00000610462 MYLK2Q9H1R3 596 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 PCMTD2Q9NV79 361 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 ABI2Q9NYB9 513 aaPredicted RBP28.71■■■□□ 2.19
CSPG5-205ENST00000610462 SFMBT1Q9UHJ3 866 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 KLF11O14901 512 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 HGSO14964 777 aaPredicted RBP28.71■■■□□ 2.19
CSPG5-205ENST00000610462 NFKB1P19838 968 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 CYB5D1Q6P9G0 228 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 NDUFAF2Q8N183 169 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 LRRC40Q9H9A6 602 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 PLXNA3P51805 1871 aa28.71■■■□□ 2.19
CSPG5-205ENST00000610462 PAGE1O75459 146 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 IL1BP01584 269 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 HOXC13P31276 330 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 PPP2R5DQ14738 602 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 ZSCAN18Q8TBC5 510 aaPredicted RBP28.7■■■□□ 2.19
CSPG5-205ENST00000610462 TSGA13Q96PP4 275 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 FAM193BQ96PV7 902 aaPredicted RBP28.7■■■□□ 2.19
CSPG5-205ENST00000610462 LRRC37BQ96QE4 947 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 NMUR1Q9HB89 426 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 STARD7Q9NQZ5 370 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 BFARQ9NZS9 450 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 SLC17A6Q9P2U8 582 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 VANGL2Q9ULK5 521 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 RPS6KL1Q9Y6S9 549 aa28.7■■■□□ 2.19
CSPG5-205ENST00000610462 TTC3P53804 2025 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 C2CD2LO14523 706 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 USP12O75317 370 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 SKIV2L2P42285 1042 aaKnown RBP28.7■■■□□ 2.18
CSPG5-205ENST00000610462 MANEALQ5VSG8 457 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 LHX8Q68G74 356 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 TRIM42Q8IWZ5 723 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 FUBP3Q96I24 572 aaKnown RBP eCLIP28.7■■■□□ 2.18
CSPG5-205ENST00000610462 FTHL17Q9BXU8 183 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 DNAJB4Q9UDY4 337 aa28.7■■■□□ 2.18
CSPG5-205ENST00000610462 PRG3Q9Y2Y8 225 aaPredicted RBP28.7■■■□□ 2.18
CSPG5-205ENST00000610462 A0A1W2PQH9 124 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 ARHGAP42A6NI28 874 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 FGF10O15520 208 aaPredicted RBP28.69■■■□□ 2.18
CSPG5-205ENST00000610462 MSI1O43347 362 aaKnown RBP28.69■■■□□ 2.18
CSPG5-205ENST00000610462 JCHAINP01591 159 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 NFE2Q16621 373 aaPredicted RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms