RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PMS2P1A4D2B8 440 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 VWA3AA6NCI4 1184 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ACOD1A6NK06 481 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 GOLGA8BA8MQT2 603 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NOTOA8MTQ0 251 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ERVV-2B6SEH9 535 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SOCS6O14544 535 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 NOL3O60936 208 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PHF2O75151 1096 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KLHL2O95198 593 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CSF1P09603 554 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 IL32P24001 234 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 HMOX2P30519 316 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CSTF2P33240 577 aaKnown RBP eCLIP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PCK1P35558 622 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KRT2P35908 639 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 LONP1P36776 959 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SERPINF1P36955 418 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 BUD31P41223 144 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ABCG1P45844 678 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 HAND2P61296 217 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SRSF2Q01130 221 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 RNASELQ05823 741 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PTPN11Q06124 597 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ELP6Q0PNE2 266 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 DCTN2Q13561 401 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ATXN7L2Q5T6C5 722 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 TTC23LQ6PF05 361 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 DBX2Q6ZNG2 339 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 BTLAQ7Z6A9 289 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC51BQ86UW2 128 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CELF5Q8N6W0 485 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 MFSD2AQ8NA29 543 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 TDRD5Q8NAT2 981 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 OR7G1Q8NGA0 311 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 OR9A1PQ8NGU1 263 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ST7LQ8TDW4 575 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KIAA1143Q96AT1 154 aaPredicted RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CCDC127Q96BQ5 260 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 P2RX7Q99572 595 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 TRIM62Q9BVG3 475 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 MID1IP1Q9NPA3 183 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 BRD7Q9NPI1 651 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 DDX19AQ9NUU7 478 aaKnown RBP5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 DLGAP2Q9P1A6 1054 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 HMGXB4Q9UGU5 601 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 ERVK-19Q9WJR5 959 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 STK38LQ9Y2H1 464 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 KLHL20Q9Y2M5 609 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 CORINQ9Y5Q5 1042 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 PSAT1Q9Y617 370 aa5.17□□□□□ -1.58
SPTBN1-206ENST00000602898 MYO3BQ8WXR4 1341 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 KIF1BO60333 1816 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 VPS37CA5D8V6 355 aaPredicted RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 H0YIN7 160 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 KHNYNO15037 678 aaKnown RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 LRRN2O75325 713 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 DIRAS3O95661 229 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 NDST3O95803 873 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 TP53P04637 393 aaPredicted RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CHRNB1P11230 501 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 NAGAP17050 411 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 GBP1P32455 592 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 IL13P35225 146 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 STARD6P59095 220 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 KRT17Q04695 432 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 UBE3AQ05086 875 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PFKFB3Q16875 520 aaPredicted RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PCGF3Q3KNV8 242 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 METTL21CQ5VZV1 264 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 FCRLBQ6BAA4 426 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 GTF2IRD2BQ6EKJ0 949 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CENPPQ6IPU0 288 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 ARMCX5Q6P1M9 558 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 HFE2Q6ZVN8 426 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 GTF2IRD2Q86UP8 949 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CADM3Q8N126 398 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CFAP61Q8NHU2 1237 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 ATL1Q8WXF7 558 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 FAM120BQ96EK7 910 aaKnown RBP5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 RNF125Q96EQ8 232 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CYFIP2Q96F07 1278 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 MYO19Q96H55 970 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CGRRF1Q99675 332 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PAG1Q9NWQ8 432 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 BTBD7Q9P203 1132 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CTTNBP2NLQ9P2B4 639 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 CACNG4Q9UBN1 327 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 NAALADL1Q9UQQ1 740 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 NFE2L3Q9Y4A8 694 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 C15orf38-AP3S2A0A0A6YYH1 394 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 C5orf60A6NFR6 353 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 XYLBO75191 536 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PCSK2P16519 638 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 LAG3P18627 525 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 GP5P40197 560 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 MFAP3P55082 362 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PMP22Q01453 160 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 DSC2Q02487 901 aa5.16□□□□□ -1.58
SPTBN1-206ENST00000602898 PDCLQ13371 301 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms