RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 NUDT12Q9BQG2 462 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GALNT8Q9NY28 637 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 NUDT5Q9UKK9 219 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ZNRF3Q9ULT6 936 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TTLL13PA6NNM8 815 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 SPTLC1O15269 473 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 EGFRP00533 1210 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 NPTX2P47972 431 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 IFI35P80217 286 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CDH17Q12864 832 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ILF2Q12905 390 aaKnown RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 BROXQ5VW32 411 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 SCARA3Q6AZY7 606 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 RRN3Q9NYV6 651 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 IFRD1O00458 451 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 SEC24AO95486 1093 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ITGB6P18564 788 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ACLYP53396 1101 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TBC1D16Q8TBP0 767 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 MYDGFQ969H8 173 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 MTIF3Q9H2K0 278 aaKnown RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GPRC5CQ9NQ84 441 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GSTM5P46439 218 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CDK7P50613 346 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 KBTBD2Q8IY47 623 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 PRKD2Q9BZL6 878 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 PDIA6Q15084 440 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF621Q6ZSS3 439 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CAMK1DQ8IU85 385 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF276Q8N554 614 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TBL1YQ9BQ87 522 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GPATCH2LQ9NWQ4 482 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ENDOD1O94919 500 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CKMP06732 381 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 FAM153BP0C7A2 387 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CYP2A7P20853 494 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TRIM28Q13263 835 aaKnown RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GIT2Q14161 759 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 FAM153CQ494X1 144 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 MPZL3Q6UWV2 235 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 HHIPL2Q6UWX4 724 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ACTRT2Q8TDY3 377 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TARBP1Q13395 1621 aaKnown RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 IDH3BO43837 385 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 STAG3L1P0CL83 205 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GRB10Q13322 594 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TTC27Q6P3X3 843 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GMEB1Q9Y692 573 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 SEC22BO75396 215 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TSPAN9O75954 239 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 AKAP3O75969 853 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 PTPAQ15257 358 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 TMEM39BQ9GZU3 492 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 POMKQ9H5K3 350 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 KBTBD4Q9NVX7 518 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 C17orf102A2RUQ5 167 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 GP5P40197 560 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 INO80DQ53TQ3 878 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CDKAL1Q5VV42 579 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 NET1Q7Z628 596 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 POMGNT2Q8NAT1 580 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 BBS4Q96RK4 519 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CHID1Q9BWS9 393 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ZMYM5Q9UJ78 669 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ANAPC2Q9UJX6 822 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 PCDHGA4Q9Y5G9 962 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 RENBPP51606 427 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 PLK1P53350 603 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.84
CSMD1-217ENST00000602723 BST2Q10589 180 aaKnown RBP9.77□□□□□ -0.84
CSMD1-217ENST00000602723 CBWD3Q5JTY5 395 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 CBWD5Q5RIA9 395 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 CLYBLQ8N0X4 340 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 NFKBIZQ9BYH8 718 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 AP3M1Q9Y2T2 418 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 RECQL5O94762 991 aaPredicted RBP9.77□□□□□ -0.84
CSMD1-217ENST00000602723 ELF3P78545 371 aaPredicted RBP9.77□□□□□ -0.84
CSMD1-217ENST00000602723 SFSWAPQ12872 951 aaKnown RBP9.77□□□□□ -0.84
CSMD1-217ENST00000602723 MZT2AQ6P582 158 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 WDR49Q8IV35 697 aa9.77□□□□□ -0.84
CSMD1-217ENST00000602723 A0A087X1B8 175 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 A0A096LPK6 155 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ZSCAN5CA6NGD5 496 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 SERPINF2P08697 491 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CLK2P49760 499 aaKnown RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 RHOAP61586 193 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ABCB10Q9NRK6 738 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 COMMD9Q9P000 198 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CRB1P82279 1406 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 MED24O75448 989 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 PYDC2Q56P42 97 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 LIN54Q6MZP7 749 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ILDR2Q71H61 639 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 FAM220AQ7Z4H9 259 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 AMER2Q8N7J2 671 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 KBTBD8Q8NFY9 601 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 MLPHQ9BV36 600 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms