RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZIM3Q96PE6 472 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 TSGA13Q96PP4 275 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 RUFY1Q96T51 708 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 RETREG1Q9H6L5 497 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 TMEM248Q9NWD8 314 aa18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-224ENST00000600718 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 RNF103O00237 685 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 CLASP2O75122 1294 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 CDC25CP30307 473 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 ARHGAP12Q8IWW6 846 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 HS6ST3Q8IZP7 471 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 CELF6Q96J87 481 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 RBM15Q96T37 977 aaKnown RBP eCLIP18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 PHACTR1Q9C0D0 580 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 SEMA4AQ9H3S1 761 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 TRPC7Q9HCX4 862 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 GKN1Q9NS71 199 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 PLAAQ9Y263 795 aa18.12■□□□□ 0.49
SHKBP1-224ENST00000600718 GOLGA6L7A0A1B0GV03 622 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 F5H5T6 163 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 AGPSO00116 658 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 OLFM2O95897 454 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 MBL2P11226 248 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 HDCP19113 662 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 CCNCP24863 283 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 FDFT1P37268 417 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 MAGEA6P43360 314 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 NDST2P52849 883 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 WASHC5Q12768 1159 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 KCNJ11Q14654 390 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 C5orf22Q49AR2 442 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 ANKRD22Q5VYY1 191 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 GAREM2Q75VX8 874 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 CCDC13Q8IYE1 715 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 UMODL1-AS1Q8N2C9 162 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 TAB3Q8N5C8 712 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 IGSF8Q969P0 613 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 PWWP2AQ96N64 755 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 RPRD1AQ96P16 312 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 GCNAQ96QF7 691 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 SLC39A8Q9C0K1 460 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 ETNK1Q9HBU6 452 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 SEPT10Q9P0V9 454 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 YBX2Q9Y2T7 364 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 DFFAO00273 331 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 CCL16O15467 120 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 OPA1O60313 960 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 FGF19O95750 216 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 PFKLP17858 780 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 CORO1AP31146 461 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 HOXA9P31269 272 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 ARL4CP56559 192 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 HSP90B2PQ58FF3 399 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 TXNDC8Q6A555 127 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 PPP1R21Q6ZMI0 780 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 CENPUQ71F23 418 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 DENND1CQ8IV53 801 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 SLC22A17Q8WUG5 538 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 VAT1Q99536 393 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 DDX50Q9BQ39 737 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 FRMD8Q9BZ67 464 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 MED4Q9NPJ6 270 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 ASAH2Q9NR71 780 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 TRHDEQ9UKU6 1024 aa18.11■□□□□ 0.49
SHKBP1-224ENST00000600718 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 H0YGN5 161 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 METTL18O95568 372 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 LATS1O95835 1130 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 KLKB1P03952 638 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 PARP6Q2NL67 630 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 ALFQ53S48 1182 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 DENND2CQ68D51 928 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 LGI2Q8N0V4 545 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 ARL14EPQ8N8R7 260 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 EXOC4Q96A65 974 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 CYP2S1Q96SQ9 504 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 CORO1BQ9BR76 489 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 EPB41L4BQ9H329 900 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 CDC42EP4Q9H3Q1 356 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 MAN1C1Q9NR34 630 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 NDFIP2Q9NV92 336 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 DPP7Q9UHL4 492 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 NFS1Q9Y697 457 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 TCRBV7S3A2A0A539 114 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 EIF3HO15372 352 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 RIPK2O43353 540 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 CNTN5O94779 1100 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 HNRNPA1P09651 372 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 PTPN3P26045 913 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 MAGEA4P43358 317 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 EIF3BP55884 814 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 SEMA5AQ13591 1074 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 HIF1AQ16665 826 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 FAM133BQ5BKY9 247 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 PID1Q7Z2X4 250 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 ZNF567Q8N184 647 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 ATPAF2Q8N5M1 289 aa18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 ATXN3LQ9H3M9 355 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms