RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 IRAK1P51617 712 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 SEMA3BQ13214 749 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 C5orf22Q49AR2 442 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 MPPE1Q53F39 396 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 ERMARDQ5T6L9 678 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 ACBD5Q5T8D3 534 aaPredicted RBP19.45■□□□□ 0.7
CCDC9-205ENST00000600117 FAM72AQ5TYM5 149 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 FAM72DQ6L9T8 149 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 FAM72BQ86X60 149 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 PSTKQ8IV42 348 aaKnown RBP19.45■□□□□ 0.7
CCDC9-205ENST00000600117 REXO1L1PQ8IX06 675 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 PYROXD2Q8N2H3 581 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 RNF10Q8N5U6 811 aaKnown RBP19.45■□□□□ 0.7
CCDC9-205ENST00000600117 LRRC57Q8N9N7 239 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 IGSF8Q969P0 613 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 HEBP1Q9NRV9 189 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 GUCA1BQ9UMX6 200 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 AP4E1Q9UPM8 1137 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 NEU3Q9UQ49 428 aa19.45■□□□□ 0.7
CCDC9-205ENST00000600117 RALGAPA1Q6GYQ0 2036 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 IGLV3-10A0A075B6K4 115 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 RARAP10276 462 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 TARSP26639 723 aaKnown RBP19.44■□□□□ 0.7
CCDC9-205ENST00000600117 HOXD9P28356 352 aaPredicted RBP19.44■□□□□ 0.7
CCDC9-205ENST00000600117 RPS24P62847 133 aaKnown RBP19.44■□□□□ 0.7
CCDC9-205ENST00000600117 GAD2Q05329 585 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 NR1H3Q13133 447 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 ANO4Q32M45 955 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 BOLA3Q53S33 107 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 EFHC2Q5JST6 749 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 TSSK4Q6SA08 328 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 C12orf40Q86WS4 652 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 HJURPQ8NCD3 748 aaPredicted RBP19.44■□□□□ 0.7
CCDC9-205ENST00000600117 TEKT4Q8WW24 435 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 TMA16Q96EY4 203 aaKnown RBP19.44■□□□□ 0.7
CCDC9-205ENST00000600117 BBS2Q9BXC9 721 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 ZWILCHQ9H900 591 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 LZTFL1Q9NQ48 299 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 PLK2Q9NYY3 685 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 OR12D3Q9UGF7 316 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 VANGL2Q9ULK5 521 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 CAPN6Q9Y6Q1 641 aa19.44■□□□□ 0.7
CCDC9-205ENST00000600117 DRGXA6NNA5 263 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 E9PAM4 449 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 NEDD8-MDP1E9PL57 170 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 TYRP14679 529 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 L1CAMP32004 1257 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 OPRD1P41143 372 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 SSR1P43307 286 aaKnown RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 NAP1L1P55209 391 aaKnown RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 IFI16Q16666 785 aaKnown RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 HADHQ16836 314 aaKnown RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 SMTNL2Q2TAL5 461 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 ATP13A4Q4VNC1 1196 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 PPM1JQ5JR12 505 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 KCNT1Q5JUK3 1230 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 MPP7Q5T2T1 576 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 NAIF1Q69YI7 327 aaPredicted RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 TPRG1Q6ZUI0 275 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 DAAM2Q86T65 1068 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 ETFBKMTQ8IXQ9 262 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 CFAP52Q8N1V2 620 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 NETO1Q8TDF5 533 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 CD101Q93033 1021 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 BHMTQ93088 406 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 KCTD15Q96SI1 283 aaPredicted RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 DHX35Q9H5Z1 703 aaKnown RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 C8orf33Q9H7E9 229 aaPredicted RBP19.43■□□□□ 0.7
CCDC9-205ENST00000600117 PIAS3Q9Y6X2 628 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 ZFYVE26Q68DK2 2539 aa19.43■□□□□ 0.7
CCDC9-205ENST00000600117 KIAA1549LQ6ZVL6 1849 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 SPECC1L-ADORA2AF8WAN1 911 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 SLC30A4O14863 429 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 CACNG3O60359 315 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 TBL1XO60907 577 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 PALMO75781 387 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 LRIG2O94898 1065 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 CYBBP04839 570 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 CTHP32929 405 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 DPYSL2Q16555 572 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 RABGAP1LQ5R372 815 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 LRRC38Q5VT99 294 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 TXNDC11Q6PKC3 985 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 POLNQ7Z5Q5 900 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 CIR1Q86X95 450 aaPredicted RBP19.42■□□□□ 0.7
CCDC9-205ENST00000600117 DDI1Q8WTU0 396 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 RPRD1AQ96P16 312 aaPredicted RBP19.42■□□□□ 0.7
CCDC9-205ENST00000600117 FBXO10Q9UK96 956 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 RAB23Q9ULC3 237 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 CLEC4EQ9ULY5 219 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 MRPS17Q9Y2R5 130 aaKnown RBP19.42■□□□□ 0.7
CCDC9-205ENST00000600117 DOCK4Q8N1I0 1966 aa19.42■□□□□ 0.7
CCDC9-205ENST00000600117 ZSCAN12O43309 604 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 SPOPO43791 374 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 LRP3O75074 770 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 KRT7P08729 469 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 HOXC13P31276 330 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 GJC1P36383 396 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 ARSEP51690 589 aa19.41■□□□□ 0.7
CCDC9-205ENST00000600117 NRLP54845 237 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms