RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 C12orf50Q8NA57 414 aaPredicted RBP29.04■■■□□ 2.24
ZNF558-206ENST00000599938 RMDN1Q96DB5 314 aa29.04■■■□□ 2.24
ZNF558-206ENST00000599938 SMOC1Q9H4F8 434 aa29.04■■■□□ 2.24
ZNF558-206ENST00000599938 LAMA1P25391 3075 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 PRR5-ARHGAP8B1AHC4 643 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 I6L893 689 aaPredicted RBP29.03■■■□□ 2.24
ZNF558-206ENST00000599938 PDGFRAP16234 1089 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 ARHGAP8P85298 464 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 SF3A2Q15428 464 aaKnown RBP29.03■■■□□ 2.24
ZNF558-206ENST00000599938 CDO1Q16878 200 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 PLA2G2CQ5R387 149 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 BNIPLQ7Z465 357 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 FAM131BQ86XD5 332 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 OR2T3Q8NH03 318 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 JOSD2Q8TAC2 188 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 RXFP2Q8WXD0 754 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 PRCCQ92733 491 aaPredicted RBP29.03■■■□□ 2.24
ZNF558-206ENST00000599938 SIPA1Q96FS4 1042 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 SELENOOQ9BVL4 669 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 TTYH3Q9C0H2 523 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 VPS45Q9NRW7 570 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 SNX10Q9Y5X0 201 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 GON4LQ3T8J9 2241 aa29.03■■■□□ 2.24
ZNF558-206ENST00000599938 DNAH14Q0VDD8 3507 aa29.02■■■□□ 2.24
ZNF558-206ENST00000599938 AP5Z1O43299 807 aa29.02■■■□□ 2.24
ZNF558-206ENST00000599938 ZNF806P0C7X5 589 aa29.02■■■□□ 2.24
ZNF558-206ENST00000599938 C1QBPQ07021 282 aaKnown RBP29.02■■■□□ 2.24
ZNF558-206ENST00000599938 RSPO4Q2I0M5 234 aaPredicted RBP29.02■■■□□ 2.24
ZNF558-206ENST00000599938 CXorf57Q6NSI4 855 aaKnown RBP29.02■■■□□ 2.24
ZNF558-206ENST00000599938 APCDD1Q8J025 514 aa29.02■■■□□ 2.24
ZNF558-206ENST00000599938 C3orf20Q8ND61 904 aa29.02■■■□□ 2.24
ZNF558-206ENST00000599938 TMPRSS4Q9NRS4 437 aa29.02■■■□□ 2.24
ZNF558-206ENST00000599938 CDV3Q9UKY7 258 aaKnown RBP29.02■■■□□ 2.24
ZNF558-206ENST00000599938 TNRC6BQ9UPQ9 1833 aaKnown RBP29.01■■■□□ 2.24
ZNF558-206ENST00000599938 C2CD4BA6NLJ0 364 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 KRT3P12035 628 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 PTGER3P43115 390 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 CTSOP43234 321 aaPredicted RBP29.01■■■□□ 2.23
ZNF558-206ENST00000599938 OXCT1P55809 520 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 UBASH3AP57075 661 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 SLC12A1Q13621 1099 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 C15orf59Q2T9L4 293 aaPredicted RBP29.01■■■□□ 2.23
ZNF558-206ENST00000599938 AASDHQ4L235 1098 aaPredicted RBP29.01■■■□□ 2.23
ZNF558-206ENST00000599938 SPDYCQ5MJ68 293 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 SFMBT2Q5VUG0 894 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 RNF219Q5W0B1 726 aaPredicted RBP29.01■■■□□ 2.23
ZNF558-206ENST00000599938 LYSMD4Q5XG99 296 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 DNAJC24Q6P3W2 148 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 METTL3Q86U44 580 aaKnown RBP29.01■■■□□ 2.23
ZNF558-206ENST00000599938 MYO19Q96H55 970 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 SYT11Q9BT88 431 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 FBRSQ9HAH7 460 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 USP36Q9P275 1121 aaKnown RBP29.01■■■□□ 2.23
ZNF558-206ENST00000599938 ERVW-1Q9UQF0 538 aa29.01■■■□□ 2.23
ZNF558-206ENST00000599938 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP29■■■□□ 2.23
ZNF558-206ENST00000599938 CLDN11O75508 207 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 ACADMP11310 421 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 TNFAIP3P21580 790 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 MZF1P28698 734 aaPredicted RBP29■■■□□ 2.23
ZNF558-206ENST00000599938 NUMBP49757 651 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 ECT2LQ008S8 904 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 ZNF177Q13360 481 aaPredicted RBP29■■■□□ 2.23
ZNF558-206ENST00000599938 CCDC14Q49A88 953 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 C5orf22Q49AR2 442 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 ACBD5Q5T8D3 534 aaPredicted RBP29■■■□□ 2.23
ZNF558-206ENST00000599938 E4F1Q66K89 784 aaPredicted RBP29■■■□□ 2.23
ZNF558-206ENST00000599938 LRRC31Q6UY01 552 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 PIGKQ92643 395 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 MRGPRX3Q96LB0 322 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 PRSS16Q9NQE7 514 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 SUN2Q9UH99 717 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 CEP192Q8TEP8 1941 aa29■■■□□ 2.23
ZNF558-206ENST00000599938 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.99■■■□□ 2.23
ZNF558-206ENST00000599938 NDUFS2O75306 463 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 SRPRAP08240 638 aaKnown RBP28.99■■■□□ 2.23
ZNF558-206ENST00000599938 PTPN9P43378 593 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 CDH4P55283 916 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 TCEAL6Q6IPX3 200 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 ZNF683Q8IZ20 524 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 DEFB119Q8N690 84 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 KDM1BQ8NB78 822 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 TCEAL3Q969E4 200 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 HAPLN3Q96S86 360 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 EDEM3Q9BZQ6 932 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 AIPL1Q9NZN9 384 aa28.99■■■□□ 2.23
ZNF558-206ENST00000599938 CNTN5O94779 1100 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 ENDOD1O94919 500 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 CD6P30203 668 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 RFC1P35251 1148 aaPredicted RBP28.98■■■□□ 2.23
ZNF558-206ENST00000599938 TPMTP51580 245 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 HNRNPA1L2Q32P51 320 aaKnown RBP28.98■■■□□ 2.23
ZNF558-206ENST00000599938 FIGNQ5HY92 759 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 SH3PXD2AQ5TCZ1 1133 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 ACAD10Q6JQN1 1059 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 PPP1R2P3Q6NXS1 205 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 STRADAQ7RTN6 431 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 NETO1Q8TDF5 533 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 C1orf74Q96LT6 269 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 MTG2Q9H4K7 406 aa28.98■■■□□ 2.23
ZNF558-206ENST00000599938 HAUS4Q9H6D7 363 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms