RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 NKAPQ8N5F7 415 aaKnown RBP20.86■□□□□ 0.93
UPF1-207ENST00000599848 MLPHQ9BV36 600 aaPredicted RBP20.86■□□□□ 0.93
UPF1-207ENST00000599848 ACSM2AQ08AH3 577 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 CSHL1Q14406 222 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 ACSM2BQ68CK6 577 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 DEFB106AQ8N104 65 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 MTMR9Q96QG7 549 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 CHP1Q99653 195 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 RACGAP1Q9H0H5 632 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 IL1RL2Q9HB29 575 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 ANAPC2Q9UJX6 822 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 ADAM21Q9UKJ8 722 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 SHOC2Q9UQ13 582 aa20.86■□□□□ 0.93
UPF1-207ENST00000599848 PAICSP22234 425 aaKnown RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 UBA1P22314 1058 aaKnown RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 FMR1Q06787 632 aaKnown RBP eCLIP20.85■□□□□ 0.931e-6■■■■□ 23.8
UPF1-207ENST00000599848 MSLNQ13421 630 aaPredicted RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 PKN1Q16512 942 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 NFIL3Q16649 462 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 INTS11Q5TA45 600 aaKnown RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 ARHGAP17Q68EM7 881 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 GPATCH2LQ9NWQ4 482 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 OPTCQ9UBM4 332 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 B2RBV5 119 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 MICAL2O94851 1124 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 TALDO1P37837 337 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 GPD2P43304 727 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 FXR1P51114 621 aaKnown RBP eCLIP20.85■□□□□ 0.935e-9■■■■■ 29.8
UPF1-207ENST00000599848 TPGS1Q6ZTW0 290 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 MILR1Q7Z6M3 343 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 KBTBD4Q9NVX7 518 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 PRKAG3Q9UGI9 489 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 POP5Q969H6 163 aaKnown RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 OLFM1Q99784 485 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 SNX8Q9Y5X2 465 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 H3BNH8 94 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 RPA3P35244 121 aaPredicted RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 CBWD6Q4V339 395 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 MACC1Q6ZN28 852 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 ST13P5Q8NFI4 369 aaPredicted RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 ZMAT2Q96NC0 199 aaKnown RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 DDX28Q9NUL7 540 aaKnown RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 TMEM120BA0PK00 339 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 COMMD2Q86X83 199 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 CPNE1Q99829 537 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 SUCOQ9UBS9 1254 aaKnown RBP20.85■□□□□ 0.93
UPF1-207ENST00000599848 DERAQ9Y315 318 aa20.85■□□□□ 0.93
UPF1-207ENST00000599848 RIMS1Q86UR5 1692 aaKnown RBP20.84■□□□□ 0.93
UPF1-207ENST00000599848 SKAP2O75563 359 aaPredicted RBP20.84■□□□□ 0.93
UPF1-207ENST00000599848 CPA3P15088 417 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 TBCDQ9BTW9 1192 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 AVENQ9NQS1 362 aaPredicted RBP20.84■□□□□ 0.93
UPF1-207ENST00000599848 PHPT1Q9NRX4 125 aaPredicted RBP20.84■□□□□ 0.93
UPF1-207ENST00000599848 KIAA1522Q9P206 1035 aaPredicted RBP20.84■□□□□ 0.93
UPF1-207ENST00000599848 C2CD2Q9Y426 696 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 GPSM3Q9Y4H4 160 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 A0A087X1B8 175 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 SLC35G4P0C7Q5 338 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 TBL3Q12788 808 aaKnown RBP20.84■□□□□ 0.93
UPF1-207ENST00000599848 HPS4Q9NQG7 708 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 TAF6LQ9Y6J9 622 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 MLH1P40692 756 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 CDH8P55286 799 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 GUCY1A3Q02108 690 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 FAXCQ5TGI0 409 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 ZNF606Q8WXB4 792 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 CAPNS2Q96L46 248 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 SIKE1Q9BRV8 207 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 VSIG10LQ86VR7 867 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 GSPT2Q8IYD1 628 aaKnown RBP20.84■□□□□ 0.93
UPF1-207ENST00000599848 TMEM132CQ8N3T6 1108 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 MKL1Q969V6 931 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 BBS2Q9BXC9 721 aa20.84■□□□□ 0.93
UPF1-207ENST00000599848 SERPINH1P50454 418 aaKnown RBP20.83■□□□□ 0.93
UPF1-207ENST00000599848 CDC73Q6P1J9 531 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 PSRC1Q6PGN9 363 aaPredicted RBP20.83■□□□□ 0.93
UPF1-207ENST00000599848 KRT77Q7Z794 578 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 PROX1Q92786 737 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 RIT1Q92963 219 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 TTPALQ9BTX7 342 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 THTPAQ9BU02 230 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 IRF6O14896 467 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 NPR3P17342 541 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 FLT3LGP49771 235 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 LLGL2Q6P1M3 1020 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 ULBP1Q9BZM6 244 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 ZYG11BQ9C0D3 744 aa20.83■□□□□ 0.93
UPF1-207ENST00000599848 ABCA6Q8N139 1617 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 RARGP13631 454 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 MAGEA9P43362 315 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 ELP6Q0PNE2 266 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 NDUFA9Q16795 377 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 PACS1Q6VY07 963 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 NEK10Q6ZWH5 1172 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 ARID3BQ8IVW6 561 aaPredicted RBP20.83■□□□□ 0.92
UPF1-207ENST00000599848 SMG7Q92540 1137 aaKnown RBP20.83■□□□□ 0.92
UPF1-207ENST00000599848 KAT2BQ92831 832 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 TKTL2Q9H0I9 626 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 DEC1Q9P2X7 70 aa20.83■□□□□ 0.92
UPF1-207ENST00000599848 RAD51CO43502 376 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms