RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 HNRNPA1L2Q32P51 320 aaKnown RBP19.37■□□□□ 0.69
PNKP-213ENST00000599543 PITRM1Q5JRX3 1037 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 RAP1GAP2Q684P5 730 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 GANCQ8TET4 914 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 MYO19Q96H55 970 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 FAM204AQ9H8W3 233 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 SGK2Q9HBY8 427 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 SLC12A6Q9UHW9 1150 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 KLK13Q9UKR3 277 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 INTS6Q9UL03 887 aaKnown RBP19.37■□□□□ 0.69
PNKP-213ENST00000599543 NCKAP1Q9Y2A7 1128 aa19.37■□□□□ 0.69
PNKP-213ENST00000599543 FREM2Q5SZK8 3169 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 GTPBP10A4D1E9 387 aaKnown RBP19.36■□□□□ 0.69
PNKP-213ENST00000599543 TMEM8BA6NDV4 472 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 BECN2A8MW95 431 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 F5H5T6 163 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 SIN3BO75182 1162 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 FSBPO95073 299 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 IGLV3-25P01717 112 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 TACR2P21452 398 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 PON1P27169 355 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 KLK7P49862 253 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 TEAD4Q15561 434 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 FSCBQ5H9T9 825 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 RNF219Q5W0B1 726 aaPredicted RBP19.36■□□□□ 0.69
PNKP-213ENST00000599543 MMS22LQ6ZRQ5 1243 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 PASD1Q8IV76 773 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 ATP6V0D2Q8N8Y2 350 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 KDM1BQ8NB78 822 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 C1orf216Q8TAB5 229 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 SETD7Q8WTS6 366 aaKnown RBP19.36■□□□□ 0.69
PNKP-213ENST00000599543 GATA6Q92908 595 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 TMEM121BQ9BXQ6 578 aaPredicted RBP19.36■□□□□ 0.69
PNKP-213ENST00000599543 NAT10Q9H0A0 1025 aaKnown RBP19.36■□□□□ 0.69
PNKP-213ENST00000599543 MTG2Q9H4K7 406 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 IL21RQ9HBE5 538 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 CBX8Q9HC52 389 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 SIX2Q9NPC8 291 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 KIAA1522Q9P206 1035 aaPredicted RBP19.36■□□□□ 0.69
PNKP-213ENST00000599543 SCML1Q9UN30 329 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 ERVW-1Q9UQF0 538 aa19.36■□□□□ 0.69
PNKP-213ENST00000599543 FAM208BQ5VWN6 2430 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 PLXNA2O75051 1894 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 A0A1B0GVT2 93 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 SRPRAP08240 638 aaKnown RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 ZNF883P0CG24 379 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 SLC2A3P11169 496 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 CDK11BP21127 795 aaKnown RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 ABCB4P21439 1286 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 CSNK1EP49674 416 aaKnown RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 COPB1P53618 953 aaKnown RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 CDK17Q00537 523 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 KCNMA1Q12791 1236 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 SFSWAPQ12872 951 aaKnown RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 ARID5BQ14865 1188 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 HLA-BQ31612 363 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 USP30Q70CQ3 517 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 LUZP1Q86V48 1076 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 KDF1Q8NAX2 398 aaPredicted RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 SHC3Q92529 594 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 RNF34Q969K3 372 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 BIRC7Q96CA5 298 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 PPP1R13BQ96KQ4 1090 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 MRGPRX3Q96LB0 322 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 NOX5Q96PH1 765 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 CPXM1Q96SM3 734 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 PABPC3Q9H361 631 aaKnown RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 TM7SF3Q9NS93 570 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.35■□□□□ 0.69
PNKP-213ENST00000599543 DDIT4Q9NX09 232 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 ZMIZ1Q9ULJ6 1067 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 FNDC3AQ9Y2H6 1198 aaKnown RBP19.35■□□□□ 0.69
PNKP-213ENST00000599543 MSRB2Q9Y3D2 182 aa19.35■□□□□ 0.69
PNKP-213ENST00000599543 SYNJ2BP-COX16A0A087WUM0 186 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 KCNU1A8MYU2 1149 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 HSF2BPO75031 334 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 GLI1P08151 1106 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 PNMA6AP0CW24 399 aaPredicted RBP19.34■□□□□ 0.69
PNKP-213ENST00000599543 ZNF18P17022 549 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 CD27P26842 260 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 CCR1P32246 355 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 CTSOP43234 321 aaPredicted RBP19.34■□□□□ 0.69
PNKP-213ENST00000599543 GRIA4P48058 902 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 PITX1P78337 314 aaPredicted RBP19.34■□□□□ 0.69
PNKP-213ENST00000599543 ECT2LQ008S8 904 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 BNC1Q01954 994 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 PTK2Q05397 1052 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 IQCB1Q15051 598 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 TAF5Q15542 800 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 EFHC1Q5JVL4 640 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 TTC39BQ5VTQ0 682 aaPredicted RBP19.34■□□□□ 0.69
PNKP-213ENST00000599543 CHCHD4Q8N4Q1 142 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 TM9SF3Q9HD45 589 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 OSGEPQ9NPF4 335 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 ASNSD1Q9NWL6 643 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 FBXL12Q9NXK8 326 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 COX16Q9P0S2 106 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 LIMA1Q9UHB6 759 aaKnown RBP19.34■□□□□ 0.69
PNKP-213ENST00000599543 PCOLCE2Q9UKZ9 415 aa19.34■□□□□ 0.69
PNKP-213ENST00000599543 PCDHGC3Q9UN70 934 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms