RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	ZSCAN5DP	P0CG00	497 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MMP8	P22894	467 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ALDH7A1	P49419	539 aa	Known RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DRG2	P55039	364 aa	Known RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TCEAL1	Q15170	157 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RBM20	Q5T481	1227 aa	Known RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C6orf118	Q5T5N4	469 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMC7	Q7Z402	723 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CAND1	Q86VP6	1230 aa	Known RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SEC14L1	Q92503	715 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ADAM33	Q9BZ11	813 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GIMAP4	Q9NUV9	329 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	INTS9	Q9NV88	658 aa	Known RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TJP2	Q9UDY2	1190 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RIPK2	O43353	540 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MED7	O43513	233 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RARG	P13631	454 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ATP6V1C1	P21283	382 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MSH2	P43246	934 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SCNN1G	P51170	649 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LRRC14	Q15048	493 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SMU1	Q2TAY7	513 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PLEKHA7	Q6IQ23	1121 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ANKMY2	Q8IV38	441 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	VCPIP1	Q96JH7	1222 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	STMN4	Q9H169	189 aa	Predicted RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NXF3	Q9H4D5	531 aa	Known RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C10orf88	Q9H8K7	445 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GOLGA2P5	Q9HBQ8	144 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SAE1	Q9UBE0	346 aa	Predicted RBP	11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ATP6V1H	Q9UI12	483 aa		11.61	□□□□□ -0.55
SUPT5H-216	ENST00000599335		H3BUI4	141 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HAT1	O14929	419 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C22orf31	O95567	290 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CRYZL1	O95825	349 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SLC4A1	P02730	911 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	P4HA1	P13674	534 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ITIH2	P19823	946 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GPS1	Q13098	491 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	BYSL	Q13895	437 aa	Known RBP	11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SIX1	Q15475	284 aa	Predicted RBP	11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HADH	Q16836	314 aa	Known RBP	11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MARCH8	Q5T0T0	291 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DEPDC1	Q5TB30	811 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	OR6B2	Q6IFH4	312 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NOTUM	Q6P988	496 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMC5	Q6UXY8	1006 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	STK32C	Q86UX6	486 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TREML1	Q86YW5	311 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	METTL5	Q9NRN9	209 aa	Known RBP	11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TADA2A	O75478	443 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CHN1	P15882	459 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ARSE	P51690	589 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GBE1	Q04446	702 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NIPAL4	Q0D2K0	466 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TXNRD3NB	Q6F5E7	133 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PTPRN2	Q92932	1015 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CFAP36	Q96G28	342 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SCPEP1	Q9HB40	452 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DNPEP	Q9ULA0	475 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SLC30A1	Q9Y6M5	507 aa		11.6	□□□□□ -0.55
SUPT5H-216	ENST00000599335	POC1B-GALNT4	F8VUJ3	575 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ETS1	P14921	441 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RGS7	P49802	495 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	THOP1	P52888	689 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	MBTD1	Q05BQ5	628 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM132D	Q14C87	1099 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RFX6	Q8HWS3	928 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	RCOR2	Q8IZ40	523 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	EXD1	Q8NHP7	514 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM40	Q8WWA1	233 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	STARD8	Q92502	1023 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ART4	Q93070	314 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	HPDL	Q96IR7	371 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	AIFM2	Q9BRQ8	373 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	VPS37B	Q9H9H4	285 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	SAYSD1	Q9NPB0	183 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PAK6	Q9NQU5	681 aa	Predicted RBP	11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ACAD8	Q9UKU7	415 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	NPPA	P01160	153 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ENPEP	Q07075	957 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CYP1B1	Q16678	543 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C6orf163	Q5TEZ5	329 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	LRRC34	Q8IZ02	419 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	C1orf127	Q8N9H9	656 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DTX3	Q8N9I9	347 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	KCTD6	Q8NC69	237 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ETNK1	Q9HBU6	452 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	TMEM191C	A6NGB0	347 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	FAM47E-STBD1	D6RA91	191 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	GOLGA8R	I6L899	631 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ZBED1	O96006	694 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ARF4	P18085	180 aa	Predicted RBP	11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	ARFIP2	P53365	341 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	CCNG2	Q16589	344 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	PTPN20	Q4JDL3	420 aa		11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	DUS1L	Q6P1R4	473 aa	Known RBP	11.59	□□□□□ -0.55
SUPT5H-216	ENST00000599335	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms