RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 FAM170AA1A519 330 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 HLA-EP13747 358 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 GNSP15586 552 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 PRKCHP24723 683 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 CD6P30203 668 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 HOXD12P35452 270 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 ATXN3P54252 364 aaPredicted RBP14.58□□□□□ -0.08
LIG1-218ENST00000599322 CDH4P55283 916 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 KRT83P78385 493 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 ZBTB16Q05516 673 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 EIF4EBP2Q13542 120 aaPredicted RBP14.58□□□□□ -0.08
LIG1-218ENST00000599322 CAMK2GQ13555 558 aaPredicted RBP14.58□□□□□ -0.08
LIG1-218ENST00000599322 CCDC6Q16204 474 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 CLEC16AQ2KHT3 1053 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 C2CD6Q53TS8 623 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 SFMBT2Q5VUG0 894 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 RNF43Q68DV7 783 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 FBXL22Q6P050 247 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 SYT12Q8IV01 421 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 SLC30A5Q8TAD4 765 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 GANCQ8TET4 914 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 P2RY11Q96G91 374 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 EDEM3Q9BZQ6 932 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 MUC3BQ9H195 1237 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 TMEM245Q9H330 911 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 ITM2CQ9NQX7 267 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 ARHGEF38Q9NXL2 777 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 SUSD2Q9UGT4 822 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 HS3ST4Q9Y661 456 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 KMT2BQ9UMN6 2715 aaPredicted RBP14.58□□□□□ -0.08
LIG1-218ENST00000599322 CACNA1BQ00975 2339 aa14.58□□□□□ -0.08
LIG1-218ENST00000599322 TPRP12270 2363 aaKnown RBP14.58□□□□□ -0.08
LIG1-218ENST00000599322 IGHV1OR15-9A0A0B4J2B8 117 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 TARSL2A2RTX5 802 aaKnown RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 MEI4A8MW99 385 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 SLC30A4O14863 429 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 TEX33O43247 280 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 GDF9O60383 454 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 UNGP13051 313 aaPredicted RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 CHRNB2P17787 502 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 UBASH3AP57075 661 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 ATP11AP98196 1134 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 CENPCQ03188 943 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 ZNF33AQ06730 810 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 SF3A2Q15428 464 aaKnown RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 PLEKHG6Q3KR16 790 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 PLA2G2CQ5R387 149 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 ZNF776Q68DI1 518 aaPredicted RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 DNAJC24Q6P3W2 148 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 DCUN1D2Q6PH85 259 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 APTXQ7Z2E3 356 aaKnown RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 VPS36Q86VN1 386 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 PHF13Q86YI8 300 aaPredicted RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 WFDC5Q8TCV5 224 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 RXFP2Q8WXD0 754 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 NT5C3BQ969T7 300 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 IQCDQ96DY2 449 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 C1orf74Q96LT6 269 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 CFAP57Q96MR6 1250 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 HAPLN3Q96S86 360 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 PRMT1Q99873 361 aaKnown RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 HSD3B7Q9H2F3 369 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 CBX8Q9HC52 389 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 TMEM59LQ9UK28 342 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 VPS28Q9UK41 221 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 SCML1Q9UN30 329 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 ERVW-1Q9UQF0 538 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
LIG1-218ENST00000599322 LAMA1P25391 3075 aa14.57□□□□□ -0.08
LIG1-218ENST00000599322 THADAQ6YHU6 1953 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 A0A1B0GTH6 734 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 EDDM13A0A1B0GTR0 161 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 ADCY5O95622 1261 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 RHOCP08134 193 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 GPD1P21695 349 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 FLT3P36888 993 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 TPMTP51580 245 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 IQCB1Q15051 598 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 CDO1Q16878 200 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 DUOXA1Q1HG43 343 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 HNRNPA1L2Q32P51 320 aaKnown RBP14.56□□□□□ -0.08
LIG1-218ENST00000599322 ACCSLQ4AC99 568 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 FSCBQ5H9T9 825 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 C6orf118Q5T5N4 469 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 DAB2IPQ5VWQ8 1189 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 ACAD10Q6JQN1 1059 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 DSG4Q86SJ6 1040 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 PHLDB2Q86SQ0 1253 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 DEFB119Q8N690 84 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 EMC1Q8N766 993 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 TOE1Q96GM8 510 aaKnown RBP14.56□□□□□ -0.08
LIG1-218ENST00000599322 CCDC114Q96M63 670 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 FUCA2Q9BTY2 467 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 C2orf49Q9BVC5 232 aaPredicted RBP14.56□□□□□ -0.08
LIG1-218ENST00000599322 MKRN2Q9H000 416 aaKnown RBP14.56□□□□□ -0.08
LIG1-218ENST00000599322 SLC6A17Q9H1V8 727 aa14.56□□□□□ -0.08
LIG1-218ENST00000599322 MBD1Q9UIS9 605 aaPredicted RBP14.56□□□□□ -0.08
LIG1-218ENST00000599322 LRRC53A6NM62 1247 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 SRGAP2O75044 1071 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms