RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 WNT1P04628 370 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 VAV1P15498 845 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
IRF3-223ENST00000599223 CCT8P50990 548 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 METAP1P53582 386 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 STX17P56962 302 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 STIM1Q13586 685 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 TEAD4Q15561 434 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 ZC3H12AQ5D1E8 599 aaKnown RBP15.19■□□□□ 0.02
IRF3-223ENST00000599223 RAP1GAP2Q684P5 730 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 NCEH1Q6PIU2 408 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 C19orf48Q6RUI8 117 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 LRSAM1Q6UWE0 723 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 USP30Q70CQ3 517 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 TMPRSS7Q7RTY8 843 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 MMAAQ8IVH4 418 aaKnown RBP15.19■□□□□ 0.02
IRF3-223ENST00000599223 APCDD1Q8J025 514 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 LGI2Q8N0V4 545 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 AADATQ8N5Z0 425 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 GOLGA1Q92805 767 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 SLC4A5Q9BY07 1137 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 FBXL12Q9NXK8 326 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 KIAA1522Q9P206 1035 aaPredicted RBP15.19■□□□□ 0.02
IRF3-223ENST00000599223 SLCO3A1Q9UIG8 710 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 ERVW-1Q9UQF0 538 aa15.19■□□□□ 0.02
IRF3-223ENST00000599223 ITIH6Q6UXX5 1313 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 BPTFQ12830 3046 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 FAM149AA5PLN7 773 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 PCDHGA12O60330 932 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 MBD3O95983 291 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 ASLP04424 464 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 KRT5P13647 590 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 PSMD8P48556 350 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 GALCP54803 685 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 APBA1Q02410 837 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 KCNH2Q12809 1159 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 MORC3Q14149 939 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 ARID5BQ14865 1188 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 TAF5Q15542 800 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 PRAMEF14Q5SWL7 426 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 GJB7Q6PEY0 223 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 CHSY1Q86X52 802 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 EHBP1Q8NDI1 1231 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 GANCQ8TET4 914 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 CDC6Q99741 560 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 NEUROG2Q9H2A3 272 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 CCDC86Q9H6F5 360 aaKnown RBP15.18■□□□□ 0.02
IRF3-223ENST00000599223 SUN2Q9UH99 717 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 RAXQ9Y2V3 346 aa15.18■□□□□ 0.02
IRF3-223ENST00000599223 ARID1BQ8NFD5 2236 aaPredicted RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 A0A1W2PPC4 97 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 TYW5A2RUC4 315 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 BECN2A8MW95 431 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 CBX4O00257 560 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 RNASEH2AO75792 299 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 AFPP02771 609 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 TACR2P21452 398 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 GRK6P43250 576 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 IRAK1P51617 712 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 ADPRHP54922 357 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 MARSP56192 900 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 ST8SIA6P61647 398 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 PPP2CBP62714 309 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 PPP2CAP67775 309 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 CENPCQ03188 943 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 PDCLQ13371 301 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 EIF4EBP2Q13542 120 aaPredicted RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 SHBQ15464 509 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 FOXR2Q6PJQ5 311 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 GATAD2AQ86YP4 633 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 STK40Q8N2I9 435 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 ZNF557Q8N988 423 aaPredicted RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 RPL10LQ96L21 214 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 FAM129BQ96TA1 746 aa15.17■□□□□ 0.02
IRF3-223ENST00000599223 PRMT1Q99873 361 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 DDX50Q9BQ39 737 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 GTPBP4Q9BZE4 634 aaKnown RBP15.17■□□□□ 0.02
IRF3-223ENST00000599223 MYLKQ15746 1914 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 A0A1B0GTQ1 180 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 EDDM13A0A1B0GTR0 161 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 PLK4O00444 970 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 VILLO15195 856 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 SART1O43290 800 aaKnown RBP15.16■□□□□ 0.02
IRF3-223ENST00000599223 LETM1O95202 739 aaPredicted RBP15.16■□□□□ 0.02
IRF3-223ENST00000599223 TRUB2O95900 331 aaKnown RBP15.16■□□□□ 0.02
IRF3-223ENST00000599223 APOEP02649 317 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 PDGFRAP16234 1089 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 MZF1P28698 734 aaPredicted RBP15.16■□□□□ 0.02
IRF3-223ENST00000599223 CLDN6P56747 220 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 RACK1P63244 317 aaKnown RBP15.16■□□□□ 0.02
IRF3-223ENST00000599223 ECT2LQ008S8 904 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 CETN1Q12798 172 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 PAK1Q13153 545 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 CAMK2BQ13554 666 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 COL28A1Q2UY09 1125 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 CCDC157Q569K6 752 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 CXorf57Q6NSI4 855 aaKnown RBP15.16■□□□□ 0.02
IRF3-223ENST00000599223 BEND5Q7L4P6 421 aa15.16■□□□□ 0.02
IRF3-223ENST00000599223 ADAT2Q7Z6V5 191 aaKnown RBP15.16■□□□□ 0.02
IRF3-223ENST00000599223 KDM1BQ8NB78 822 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms