RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 SETD7Q8WTS6 366 aaKnown RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 SNX19Q92543 992 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 MRGPRX3Q96LB0 322 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CAMK1GQ96NX5 476 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 NUCKS1Q9H1E3 243 aaKnown RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 FBXL12Q9NXK8 326 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 STIM2Q9P246 746 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 DKK4Q9UBT3 224 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 APEX2Q9UBZ4 518 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 RWDD2AQ9UIY3 292 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 INTS6Q9UL03 887 aaKnown RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 PCDHGC3Q9UN70 934 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CTNND2Q9UQB3 1225 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 ERVW-1Q9UQF0 538 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 FNDC3AQ9Y2H6 1198 aaKnown RBP14.08□□□□□ -0.16
TRIM28-211ENST00000597968 CHD6Q8TD26 2715 aa14.08□□□□□ -0.16
TRIM28-211ENST00000597968 A0A1B0GVM2 712 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 TCAF2A6NFQ2 919 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 E5RJQ4 531 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 E9PAM4 449 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 F5H5T6 163 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 PIK3R2O00459 728 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 BIN1O00499 593 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 TNFSF14O43557 240 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 SIN3BO75182 1162 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 LETM1O95202 739 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-211ENST00000597968 ABCB4P21439 1286 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 C5AR1P21730 350 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 CTSKP43235 329 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 CCR5P51681 352 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 CDK17Q00537 523 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 PDCLQ13371 301 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 ELAVL3Q14576 367 aaKnown RBP14.07□□□□□ -0.16
TRIM28-211ENST00000597968 KIF19Q2TAC6 998 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 RABGAP1LQ5R372 815 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 C9orf64Q5T6V5 341 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 SYPL2Q5VXT5 272 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 TRIM65Q6PJ69 517 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 SND1Q7KZF4 910 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM28-211ENST00000597968 TMPRSS7Q7RTY8 843 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 ADAT2Q7Z6V5 191 aaKnown RBP14.07□□□□□ -0.16
TRIM28-211ENST00000597968 CACUL1Q86Y37 369 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 ZDHHC17Q8IUH5 632 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 ZNF366Q8N895 744 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 ORAI3Q9BRQ5 295 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 ACE2Q9BYF1 805 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-211ENST00000597968 RRN3Q9NYV6 651 aa14.07□□□□□ -0.16
TRIM28-211ENST00000597968 SLC7A4O43246 635 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 THAP12O43422 761 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 HSF2BPO75031 334 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 FSBPO95073 299 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 IGHV4-34P06331 123 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 GOT1P17174 413 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 TACR2P21452 398 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 GALCP54803 685 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 C21orf59P57076 290 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 EXOC3L4Q17RC7 722 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 FSCBQ5H9T9 825 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 DENND1BQ6P3S1 775 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 LRSAM1Q6UWE0 723 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 GBP6Q6ZN66 633 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 DSG4Q86SJ6 1040 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 CHSY1Q86X52 802 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 LGI2Q8N0V4 545 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 OXR1Q8N573 874 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 SHC3Q92529 594 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 FAM131CQ96AQ9 280 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 SLC2A13Q96QE2 648 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 SPAG5Q96R06 1193 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 PRMT1Q99873 361 aaKnown RBP14.06□□□□□ -0.16
TRIM28-211ENST00000597968 OMDQ99983 421 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 IL21RQ9HBE5 538 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 SNX11Q9Y5W9 270 aa14.06□□□□□ -0.16
TRIM28-211ENST00000597968 ALOX15BO15296 676 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 MAGEC1O60732 1142 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 MOCS2O96007 188 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-211ENST00000597968 SLC8A1P32418 973 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 STX17P56962 302 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 PTK2Q05397 1052 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 OVGP1Q12889 678 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 SLC45A4Q5BKX6 768 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 ZC3H12AQ5D1E8 599 aaKnown RBP14.05□□□□□ -0.16
TRIM28-211ENST00000597968 FAM46CQ5VWP2 391 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 RAP1GAP2Q684P5 730 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 SLCO6A1Q86UG4 719 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 C1orf131Q8NDD1 294 aaKnown RBP14.05□□□□□ -0.16
TRIM28-211ENST00000597968 GANCQ8TET4 914 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 PPP1R13BQ96KQ4 1090 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 CCDC86Q9H6F5 360 aaKnown RBP14.05□□□□□ -0.16
TRIM28-211ENST00000597968 ERVMER34-1Q9H9K5 563 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 TOR4AQ9NXH8 423 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 KIAA1468Q9P260 1216 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 CEP83Q9Y592 693 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 PAXBP1Q9Y5B6 917 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 PCDHGA1Q9Y5H4 931 aa14.05□□□□□ -0.16
TRIM28-211ENST00000597968 AKAP13Q12802 2813 aa14.04□□□□□ -0.16
TRIM28-211ENST00000597968 LAMA5O15230 3695 aa14.04□□□□□ -0.16
TRIM28-211ENST00000597968 A0A1B0GTQ1 180 aa14.04□□□□□ -0.16
TRIM28-211ENST00000597968 MID1O15344 667 aa14.04□□□□□ -0.16
TRIM28-211ENST00000597968 RNASEH2AO75792 299 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms