RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 FANCLQ9NW38 375 aa15.68■□□□□ 0.1
TGFB1-202ENST00000597453 APEX2Q9UBZ4 518 aa15.68■□□□□ 0.1
TGFB1-202ENST00000597453 AJAP1Q9UKB5 411 aaPredicted RBP15.68■□□□□ 0.1
TGFB1-202ENST00000597453 FAM208BQ5VWN6 2430 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 TTC34A8MYJ7 566 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 CBFA2T3O75081 653 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 ASLP04424 464 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 PON1P27169 355 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 MATKP42679 507 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 CSNK1EP49674 416 aaKnown RBP15.67■□□□□ 0.1
TGFB1-202ENST00000597453 NUMBP49757 651 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 ST8SIA6P61647 398 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 EIF4EBP2Q13542 120 aaPredicted RBP15.67■□□□□ 0.1
TGFB1-202ENST00000597453 HNRNPDQ14103 355 aaKnown RBP15.67■□□□□ 0.1
TGFB1-202ENST00000597453 NCAPHQ15003 741 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 HLA-BQ31612 363 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 HNRNPA1L2Q32P51 320 aaKnown RBP15.67■□□□□ 0.1
TGFB1-202ENST00000597453 TTC31Q49AM3 519 aaPredicted RBP15.67■□□□□ 0.1
TGFB1-202ENST00000597453 SMYD5Q6GMV2 418 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 LAYNQ6UX15 382 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 CHSY1Q86X52 802 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 PASD1Q8IV76 773 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 APCDD1Q8J025 514 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 SHC3Q92529 594 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 CPXM1Q96SM3 734 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 ORAI3Q9BRQ5 295 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 TRIM62Q9BVG3 475 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 PABPC3Q9H361 631 aaKnown RBP15.67■□□□□ 0.1
TGFB1-202ENST00000597453 TM9SF3Q9HD45 589 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 TAB2Q9NYJ8 693 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 SERGEFQ9UGK8 458 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 PCOLCE2Q9UKZ9 415 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 ERVW-1Q9UQF0 538 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 MSRB2Q9Y3D2 182 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 ZFYVE26Q68DK2 2539 aa15.67■□□□□ 0.1
TGFB1-202ENST00000597453 LAMA5O15230 3695 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 PLXNB3Q9ULL4 1909 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 PTPRBP23467 1997 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 SYCE3A1L190 88 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 H0Y626 953 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 FSBPO95073 299 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 TRIM16O95361 564 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 CER1O95813 267 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 TPM2P07951 284 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 FTH1P19P0C7X4 201 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 ZNF18P17022 549 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 AFF3P51826 1226 aaKnown RBP15.66■□□□□ 0.1
TGFB1-202ENST00000597453 KRT31Q15323 416 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 ZNF423Q2M1K9 1284 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 KIF19Q2TAC6 998 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 C9orf64Q5T6V5 341 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 IL27RAQ6UWB1 636 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 RAB44Q7Z6P3 723 aaPredicted RBP15.66■□□□□ 0.1
TGFB1-202ENST00000597453 CIR1Q86X95 450 aaPredicted RBP15.66■□□□□ 0.1
TGFB1-202ENST00000597453 DEFB106AQ8N104 65 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 PNPLA1Q8N8W4 532 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 BTN2A3PQ96KV6 586 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 SLC2A13Q96QE2 648 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 PRMT1Q99873 361 aaKnown RBP15.66■□□□□ 0.1
TGFB1-202ENST00000597453 FAM204AQ9H8W3 233 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 SGK2Q9HBY8 427 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 SIX2Q9NPC8 291 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 TM7SF3Q9NS93 570 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 SLCO3A1Q9UIG8 710 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 PCDHB9Q9Y5E1 797 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 SNX11Q9Y5W9 270 aa15.66■□□□□ 0.1
TGFB1-202ENST00000597453 SYNJ2BP-COX16A0A087WUM0 186 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 FAM221BA6H8Z2 402 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 KCNU1A8MYU2 1149 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 PES1O00541 588 aaKnown RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 MID1O15344 667 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 GRAP2O75791 330 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 IGHV4-34P06331 123 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 SRPRAP08240 638 aaKnown RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 ZNF883P0CG24 379 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 PNMA6AP0CW24 399 aaPredicted RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 STK19P49842 368 aaPredicted RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 ARID5BQ14865 1188 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 CST6Q15828 149 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 CCDC117Q8IWD4 279 aaPredicted RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 KDM1BQ8NB78 822 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 C1orf131Q8NDD1 294 aaKnown RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 ANKRD20A12PQ8NF67 263 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 SETD7Q8WTS6 366 aaKnown RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 ZCCHC14Q8WYQ9 949 aaKnown RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 PPP1R13BQ96KQ4 1090 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 HSD3B7Q9H2F3 369 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 OSGEPQ9NPF4 335 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 FBXL12Q9NXK8 326 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 COX16Q9P0S2 106 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 KIAA1522Q9P206 1035 aaPredicted RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 LIMA1Q9UHB6 759 aaKnown RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 RALYQ9UKM9 306 aaKnown RBP15.65■□□□□ 0.1
TGFB1-202ENST00000597453 PCDHGC3Q9UN70 934 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 ITIH6Q6UXX5 1313 aa15.65■□□□□ 0.1
TGFB1-202ENST00000597453 ANKRD11Q6UB99 2663 aaPredicted RBP15.64■□□□□ 0.09
TGFB1-202ENST00000597453 A0A1W2PP55 124 aa15.64■□□□□ 0.09
TGFB1-202ENST00000597453 TMEM8BA6NDV4 472 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms