RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ZNF148Q9UQR1 794 aa15.07■□□□□ 0
VRK3-212ENST00000596814 ZFP37Q9Y6Q3 630 aaPredicted RBP15.07■□□□□ 0
VRK3-212ENST00000596814 H7C0C1 242 aa15.06■□□□□ 0
VRK3-212ENST00000596814 ECEL1O95672 775 aa15.06■□□□□ 0
VRK3-212ENST00000596814 ITGAVP06756 1048 aa15.06■□□□□ 0
VRK3-212ENST00000596814 CHKAP35790 457 aa15.06■□□□□ 0
VRK3-212ENST00000596814 ATP5OP48047 213 aa15.06■□□□□ 0
VRK3-212ENST00000596814 MAPKAPK2P49137 400 aa15.06■□□□□ 0
VRK3-212ENST00000596814 SGSHP51688 502 aa15.06■□□□□ 0
VRK3-212ENST00000596814 RPS24P62847 133 aaKnown RBP15.06■□□□□ 0
VRK3-212ENST00000596814 XRCC4Q13426 336 aa15.06■□□□□ 0
VRK3-212ENST00000596814 GLE1Q53GS7 698 aaKnown RBP15.06■□□□□ 0
VRK3-212ENST00000596814 FAM78AQ5JUQ0 283 aa15.06■□□□□ 0
VRK3-212ENST00000596814 Q7L0L9 218 aa15.06■□□□□ 0
VRK3-212ENST00000596814 MAATS1Q7Z4T9 603 aa15.06■□□□□ 0
VRK3-212ENST00000596814 CCDC33Q8N5R6 958 aa15.06■□□□□ 0
VRK3-212ENST00000596814 NETO2Q8NC67 525 aa15.06■□□□□ 0
VRK3-212ENST00000596814 HJURPQ8NCD3 748 aaPredicted RBP15.06■□□□□ 0
VRK3-212ENST00000596814 ATL2Q8NHH9 583 aa15.06■□□□□ 0
VRK3-212ENST00000596814 LRRC1Q9BTT6 524 aa15.06■□□□□ 0
VRK3-212ENST00000596814 KLC2Q9H0B6 622 aa15.06■□□□□ 0
VRK3-212ENST00000596814 RETREG1Q9H6L5 497 aa15.06■□□□□ 0
VRK3-212ENST00000596814 NDFIP2Q9NV92 336 aa15.06■□□□□ 0
VRK3-212ENST00000596814 ZNF212Q9UDV6 495 aa15.06■□□□□ 0
VRK3-212ENST00000596814 FEZ2Q9UHY8 353 aaPredicted RBP15.06■□□□□ 0
VRK3-212ENST00000596814 CD207Q9UJ71 328 aa15.06■□□□□ 0
VRK3-212ENST00000596814 NUP205Q92621 2012 aa15.06■□□□□ 0
VRK3-212ENST00000596814 A0A1B0GVM2 712 aa15.06■□□□□ 0
VRK3-212ENST00000596814 TCAF2A6NFQ2 919 aa15.06■□□□□ 0
VRK3-212ENST00000596814 GFRA2O00451 464 aa15.06■□□□□ 0
VRK3-212ENST00000596814 PPP1R12AO14974 1030 aaPredicted RBP15.06■□□□□ 0
VRK3-212ENST00000596814 TTI1O43156 1089 aa15.06■□□□□ 0
VRK3-212ENST00000596814 RHOXF2BP0C7M4 288 aa15.06■□□□□ 0
VRK3-212ENST00000596814 MX2P20592 715 aa15.06■□□□□ 0
VRK3-212ENST00000596814 CDH4P55283 916 aa15.06■□□□□ 0
VRK3-212ENST00000596814 MRPS25P82663 173 aaKnown RBP15.06■□□□□ 0
VRK3-212ENST00000596814 LMNB2Q03252 620 aa15.06■□□□□ 0
VRK3-212ENST00000596814 PDK1Q15118 436 aa15.06■□□□□ 0
VRK3-212ENST00000596814 DARS2Q6PI48 645 aaKnown RBP15.06■□□□□ 0
VRK3-212ENST00000596814 CHST9Q7L1S5 443 aa15.06■□□□□ 0
VRK3-212ENST00000596814 CDKL3Q8IVW4 592 aaPredicted RBP15.06■□□□□ 0
VRK3-212ENST00000596814 TDRD5Q8NAT2 981 aaKnown RBP15.06■□□□□ 0
VRK3-212ENST00000596814 SLCO2A1Q92959 643 aa15.06■□□□□ 0
VRK3-212ENST00000596814 CELF6Q96J87 481 aaKnown RBP15.06■□□□□ 0
VRK3-212ENST00000596814 NECTIN4Q96NY8 510 aa15.06■□□□□ 0
VRK3-212ENST00000596814 QKIQ96PU8 341 aaKnown RBP eCLIP15.06■□□□□ 0
VRK3-212ENST00000596814 CDX2Q99626 313 aaPredicted RBP15.06■□□□□ 0
VRK3-212ENST00000596814 RHOXF2Q9BQY4 288 aa15.06■□□□□ 0
VRK3-212ENST00000596814 TMEM121Q9BTD3 319 aa15.06■□□□□ 0
VRK3-212ENST00000596814 POMKQ9H5K3 350 aa15.06■□□□□ 0
VRK3-212ENST00000596814 TBC1D14Q9P2M4 693 aa15.06■□□□□ 0
VRK3-212ENST00000596814 DRG1Q9Y295 367 aaKnown RBP15.06■□□□□ 0
VRK3-212ENST00000596814 HACD1B0YJ81 288 aa15.05■□□□□ -0
VRK3-212ENST00000596814 NCAM2O15394 837 aa15.05■□□□□ -0
VRK3-212ENST00000596814 TBL1XO60907 577 aa15.05■□□□□ -0
VRK3-212ENST00000596814 CLDN11O75508 207 aa15.05■□□□□ -0
VRK3-212ENST00000596814 GAS8O95995 478 aa15.05■□□□□ -0
VRK3-212ENST00000596814 OR1E1P30953 314 aa15.05■□□□□ -0
VRK3-212ENST00000596814 PTGIRP43119 386 aa15.05■□□□□ -0
VRK3-212ENST00000596814 GALNT2Q10471 571 aa15.05■□□□□ -0
VRK3-212ENST00000596814 ERCC6LQ2NKX8 1250 aa15.05■□□□□ -0
VRK3-212ENST00000596814 SLC45A4Q5BKX6 768 aa15.05■□□□□ -0
VRK3-212ENST00000596814 GSTA5Q7RTV2 222 aa15.05■□□□□ -0
VRK3-212ENST00000596814 JAMLQ86YT9 394 aa15.05■□□□□ -0
VRK3-212ENST00000596814 ARHGAP12Q8IWW6 846 aa15.05■□□□□ -0
VRK3-212ENST00000596814 TP53INP2Q8IXH6 220 aa15.05■□□□□ -0
VRK3-212ENST00000596814 UMODL1-AS1Q8N2C9 162 aa15.05■□□□□ -0
VRK3-212ENST00000596814 KIAA1958Q8N8K9 716 aa15.05■□□□□ -0
VRK3-212ENST00000596814 TFB1MQ8WVM0 346 aaKnown RBP15.05■□□□□ -0
VRK3-212ENST00000596814 MYADMQ96S97 322 aa15.05■□□□□ -0
VRK3-212ENST00000596814 TRPV4Q9HBA0 871 aa15.05■□□□□ -0
VRK3-212ENST00000596814 NYNRINQ9P2P1 1898 aaKnown RBP15.05■□□□□ -0
VRK3-212ENST00000596814 KIF26AQ9ULI4 1882 aaPredicted RBP15.04■□□□□ -0
VRK3-212ENST00000596814 BCLAF3A2AJT9 711 aaKnown RBP15.04■□□□□ -0
VRK3-212ENST00000596814 CFAP69A5D8W1 941 aa15.04■□□□□ -0
VRK3-212ENST00000596814 FAM187AA6NFU0 413 aa15.04■□□□□ -0
VRK3-212ENST00000596814 SGK1O00141 431 aa15.04■□□□□ -0
VRK3-212ENST00000596814 DFFAO00273 331 aa15.04■□□□□ -0
VRK3-212ENST00000596814 SLC9A3R1O14745 358 aaPredicted RBP15.04■□□□□ -0
VRK3-212ENST00000596814 CTIFO43310 598 aaKnown RBP15.04■□□□□ -0
VRK3-212ENST00000596814 FOSL2P15408 326 aa15.04■□□□□ -0
VRK3-212ENST00000596814 GBP2P32456 591 aaPredicted RBP15.04■□□□□ -0
VRK3-212ENST00000596814 VIPR2P41587 438 aa15.04■□□□□ -0
VRK3-212ENST00000596814 NDST2P52849 883 aa15.04■□□□□ -0
VRK3-212ENST00000596814 PPP1R7Q15435 360 aa15.04■□□□□ -0
VRK3-212ENST00000596814 MPPE1Q53F39 396 aa15.04■□□□□ -0
VRK3-212ENST00000596814 AFMIDQ63HM1 303 aa15.04■□□□□ -0
VRK3-212ENST00000596814 ALLCQ8N6M5 410 aa15.04■□□□□ -0
VRK3-212ENST00000596814 BPIFB1Q8TDL5 484 aa15.04■□□□□ -0
VRK3-212ENST00000596814 RSAD2Q8WXG1 361 aa15.04■□□□□ -0
VRK3-212ENST00000596814 HDAC11Q96DB2 347 aa15.04■□□□□ -0
VRK3-212ENST00000596814 OTUB2Q96DC9 234 aa15.04■□□□□ -0
VRK3-212ENST00000596814 RSPRY1Q96DX4 576 aa15.04■□□□□ -0
VRK3-212ENST00000596814 TMA16Q96EY4 203 aaKnown RBP15.04■□□□□ -0
VRK3-212ENST00000596814 C10orf88Q9H8K7 445 aa15.04■□□□□ -0
VRK3-212ENST00000596814 OBP2AQ9NY56 170 aa15.04■□□□□ -0
VRK3-212ENST00000596814 USP15Q9Y4E8 981 aaPredicted RBP15.04■□□□□ -0
VRK3-212ENST00000596814 SHROOM3Q8TF72 1996 aa15.04■□□□□ -0
VRK3-212ENST00000596814 CHD5Q8TDI0 1954 aa15.04■□□□□ -0
VRK3-212ENST00000596814 H3BQ06 376 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms