RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SH3RF2Q8TEC5 729 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 ING5Q8WYH8 240 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 RTP4Q96DX8 246 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 TRIM51Q9BSJ1 452 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 SMG9Q9H0W8 520 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 NOL6Q9H6R4 1146 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 C10orf88Q9H8K7 445 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 USP29Q9HBJ7 922 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 GDF3Q9NR23 364 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 NDFIP2Q9NV92 336 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 RAB21Q9UL25 225 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 ZNF148Q9UQR1 794 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 CCL26Q9Y258 94 aa15.16■□□□□ 0.02
SHKBP1-211ENST00000595945 E2F8A0AVK6 867 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 CFAP69A5D8W1 941 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 H7C0C1 242 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 TBX10O75333 385 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 MAP3K6O95382 1288 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 GAS8O95995 478 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 FSHRP23945 695 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 ATP5OP48047 213 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 MAPKAPK2P49137 400 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 PDK1Q15118 436 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 SLC45A4Q5BKX6 768 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 RABGAP1LQ5R372 815 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 RNF43Q68DV7 783 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 WDR93Q6P2C0 686 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 DARS2Q6PI48 645 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 CHST9Q7L1S5 443 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 ZC3H18Q86VM9 953 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 NPAS3Q8IXF0 933 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 KIAA1958Q8N8K9 716 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 CCDC114Q96M63 670 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 RPRD1AQ96P16 312 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 ERP44Q9BS26 406 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 TMEM121Q9BTD3 319 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 APOL5Q9BWW9 433 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 PARD6BQ9BYG5 372 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 BRD8Q9H0E9 1235 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 TDP1Q9NUW8 608 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 SH3BP1Q9Y3L3 701 aa15.15■□□□□ 0.02
SHKBP1-211ENST00000595945 REV3LO60673 3130 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 ZSCAN5CA6NGD5 496 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 NCAM2O15394 837 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 KRT14P02533 472 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 MX2P20592 715 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 IVDP26440 423 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 TNFRSF8P28908 595 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 STIP1P31948 543 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 LTBRP36941 435 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 SGSHP51688 502 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 NDST2P52849 883 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 DRG2P55039 364 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 GDF10P55107 478 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 CDH4P55283 916 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 GUCY2DQ02846 1103 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 DLX2Q07687 328 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 ARID3BQ8IVW6 561 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 BBS7Q8IWZ6 715 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 GLIS1Q8NBF1 620 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 NETO2Q8NC67 525 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 CASKIN2Q8WXE0 1202 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 HDAC11Q96DB2 347 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 MSLNLQ96KJ4 702 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 TSGA13Q96PP4 275 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 SLC39A8Q9C0K1 460 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 RAB17Q9H0T7 212 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 KIF9Q9HAQ2 790 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 PCDH9Q9HC56 1237 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 DONSONQ9NYP3 566 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 CDH22Q9UJ99 828 aa15.14■□□□□ 0.01
SHKBP1-211ENST00000595945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 TRDMT1O14717 391 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 PPP1R12AO14974 1030 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 ZNF189O75820 626 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 TUBBP07437 444 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 VAV1P15498 845 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 RBL1P28749 1068 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 GARSP41250 739 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 VSNL1P62760 191 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 RPS24P62847 133 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 ZNF33AQ06730 810 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 PPIDQ08752 370 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 CBX2Q14781 532 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 KCTD19Q17RG1 926 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 PRPF38BQ5VTL8 546 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 TTC39BQ5VTQ0 682 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 B4GALNT4Q76KP1 1039 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 TFAP2DQ7Z6R9 452 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 CIR1Q86X95 450 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 CCDC33Q8N5R6 958 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 FAM71DQ8N9W8 422 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 HJURPQ8NCD3 748 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 ZSCAN18Q8TBC5 510 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 TFB1MQ8WVM0 346 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 PABPC5Q96DU9 382 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 P2RY11Q96G91 374 aa15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 CELF6Q96J87 481 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-211ENST00000595945 LGMNQ99538 433 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms