RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 CDH6P55285 790 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 GRSF1Q12849 480 aaKnown RBP eCLIP15.4■□□□□ 0.06
DDX49-204ENST00000595858 ZNF177Q13360 481 aaPredicted RBP15.4■□□□□ 0.06
DDX49-204ENST00000595858 CDH18Q13634 790 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 PREPLQ4J6C6 727 aaPredicted RBP15.4■□□□□ 0.06
DDX49-204ENST00000595858 FSCBQ5H9T9 825 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 GRAMD4Q6IC98 578 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 TFAP2DQ7Z6R9 452 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 CCDC117Q8IWD4 279 aaPredicted RBP15.4■□□□□ 0.06
DDX49-204ENST00000595858 SUGP1Q8IWZ8 645 aaKnown RBP15.4■□□□□ 0.06
DDX49-204ENST00000595858 SYCE1Q8N0S2 351 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 ZNF557Q8N988 423 aaPredicted RBP15.4■□□□□ 0.06
DDX49-204ENST00000595858 EPHX3Q9H6B9 360 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 TBC1D17Q9HA65 648 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 PCDH18Q9HCL0 1135 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 CWC15Q9P013 229 aaKnown RBP15.4■□□□□ 0.06
DDX49-204ENST00000595858 ZNF212Q9UDV6 495 aa15.4■□□□□ 0.06
DDX49-204ENST00000595858 NDRG2Q9UN36 371 aaKnown RBP15.4■□□□□ 0.06
DDX49-204ENST00000595858 A0A0A0MRY4 1105 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 TMEM221A6NGB7 291 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 M0R296 226 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 EEF2KO00418 725 aaKnown RBP15.39■□□□□ 0.05
DDX49-204ENST00000595858 STK25O00506 426 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 KAT7O95251 611 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 RHOQP17081 205 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 GOT1P17174 413 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 HLA-FP30511 346 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 GRIA2P42262 883 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 HCAR3P49019 387 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 TPI1P60174 286 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 KDSRQ06136 332 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 ZFYVE27Q5T4F4 411 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 FSTL4Q6MZW2 842 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 NLRP14Q86W24 1093 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 ZNF687Q8N1G0 1237 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 TERB1Q8NA31 727 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 KCTD6Q8NC69 237 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 FAM71BQ8TC56 605 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 LMLNQ96KR4 655 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 NELL2Q99435 816 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 FOXQ1Q9C009 403 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 RETREG1Q9H6L5 497 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 LTB4R2Q9NPC1 389 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 ABCB8Q9NUT2 735 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 KLHL11Q9NVR0 708 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 TRMT1Q9NXH9 659 aaKnown RBP15.39■□□□□ 0.05
DDX49-204ENST00000595858 TBC1D30Q9Y2I9 924 aa15.39■□□□□ 0.05
DDX49-204ENST00000595858 MTF2Q9Y483 593 aaPredicted RBP15.39■□□□□ 0.05
DDX49-204ENST00000595858 TBC1D3BA6NDS4 549 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 KIF2AO00139 706 aaPredicted RBP15.38■□□□□ 0.05
DDX49-204ENST00000595858 PSTPIP1O43586 416 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 APODP05090 189 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 CD48P09326 243 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 DRD1P21728 446 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 TARSP26639 723 aaKnown RBP15.38■□□□□ 0.05
DDX49-204ENST00000595858 OR1E1P30953 314 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 ARL4AP40617 200 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 KRT81Q14533 505 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 PDK2Q15119 407 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 CXorf57Q6NSI4 855 aaKnown RBP15.38■□□□□ 0.05
DDX49-204ENST00000595858 RFX8Q6ZV50 586 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 NT5DC3Q86UY8 548 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 ANKRD7Q92527 254 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 RAPGEF5Q92565 580 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 MFSD1Q9H3U5 465 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 CATSPERBQ9H7T0 1116 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 TMEM248Q9NWD8 314 aa15.38■□□□□ 0.05
DDX49-204ENST00000595858 FAM170BA6NMN3 283 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 H3BRJ5 948 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 DAPK3O43293 454 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 FTCDO95954 541 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 PDGFBP01127 241 aaPredicted RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 KDELR1P24390 212 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 IL4RP24394 825 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 CD70P32970 193 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 LMAN2Q12907 356 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 UBXN2BQ14CS0 331 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 GEN1Q17RS7 908 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 PEX26Q7Z412 305 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 KIAA0907Q7Z7F0 614 aaPredicted RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 SETD3Q86TU7 594 aaPredicted RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 MAP7D3Q8IWC1 876 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 SFTPA1Q8IWL2 248 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.37■□□□□ 0.05
DDX49-204ENST00000595858 OR52K2Q8NGK3 314 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 TSC1Q92574 1164 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 KRT35Q92764 455 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 EZH1Q92800 747 aaPredicted RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 CSPG4P5Q96PW8 444 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 NDFIP2Q9NV92 336 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 DDX56Q9NY93 547 aaKnown RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 KIAA1522Q9P206 1035 aaPredicted RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 GGA2Q9UJY4 613 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 AMFRQ9UKV5 643 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 DOCK4Q8N1I0 1966 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 WASH4PA8MWX3 477 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 FGF10O15520 208 aaPredicted RBP15.37■□□□□ 0.05
DDX49-204ENST00000595858 EGFP01133 1207 aa15.37■□□□□ 0.05
DDX49-204ENST00000595858 PABPC1P11940 636 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms