RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 HNRNPA1L2Q32P51 320 aaKnown RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 DCAF6Q58WW2 860 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 IL27RAQ6UWB1 636 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 NAXDQ8IW45 347 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 CARNMT1Q8N4J0 409 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 BTN2A3PQ96KV6 586 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 PCMTD1Q96MG8 357 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 BTBD1Q9H0C5 482 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 RSPH9Q9H1X1 276 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 C6orf106Q9H6K1 298 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 SIX2Q9NPC8 291 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 OSGEPQ9NPF4 335 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 ACP6Q9NPH0 428 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 RTN4Q9NQC3 1192 aaKnown RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 ASNSD1Q9NWL6 643 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 TJP2Q9UDY2 1190 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 EIF2B4Q9UI10 523 aaKnown RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 INTS6Q9UL03 887 aaKnown RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 SCML1Q9UN30 329 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 PCDHGC3Q9UN70 934 aa18.52■□□□□ 0.56
HOMER3-208ENST00000595756 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-208ENST00000595756 ITIH6Q6UXX5 1313 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 TMEM8BA6NDV4 472 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 C1QTNF9BB2RNN3 333 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 SEMA4FO95754 770 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 TOP3BO95985 862 aaKnown RBP18.51■□□□□ 0.55
HOMER3-208ENST00000595756 GLI1P08151 1106 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 SRPRAP08240 638 aaKnown RBP18.51■□□□□ 0.55
HOMER3-208ENST00000595756 C1QTNF9P0C862 333 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 SPINK2P20155 84 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 TACR2P21452 398 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 AFF3P51826 1226 aaKnown RBP18.51■□□□□ 0.55
HOMER3-208ENST00000595756 ZNF423Q2M1K9 1284 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 PITRM1Q5JRX3 1037 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 TTC39BQ5VTQ0 682 aaPredicted RBP18.51■□□□□ 0.55
HOMER3-208ENST00000595756 USP30Q70CQ3 517 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 CHSY1Q86X52 802 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 SNX19Q92543 992 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 GATA6Q92908 595 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 MRGPRX3Q96LB0 322 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 SLC2A13Q96QE2 648 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 SGK2Q9HBY8 427 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 XPO7Q9UIA9 1087 aaKnown RBP18.51■□□□□ 0.55
HOMER3-208ENST00000595756 TMEM131Q92545 1883 aa18.51■□□□□ 0.55
HOMER3-208ENST00000595756 PLXNA2O75051 1894 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 A0A1B0GTH6 734 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 HYAL3O43820 417 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-208ENST00000595756 HSF2BPO75031 334 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 MOCS3O95396 460 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 TPM3P06753 285 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 UCHL3P15374 230 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 RDXP35241 583 aaKnown RBP18.5■□□□□ 0.55
HOMER3-208ENST00000595756 MATKP42679 507 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 BPIFB4P59827 614 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 FAM193AP78312 1265 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 BNC1Q01954 994 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 SYCP1Q15431 976 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 ARHGAP44Q17R89 818 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 ZC3H12AQ5D1E8 599 aaKnown RBP18.5■□□□□ 0.55
HOMER3-208ENST00000595756 FSCBQ5H9T9 825 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 RAP1GAP2Q684P5 730 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 LGI2Q8N0V4 545 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 CFAP52Q8N1V2 620 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 ATP6V0D2Q8N8Y2 350 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 KDF1Q8NAX2 398 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-208ENST00000595756 NEK11Q8NG66 645 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 CPXM1Q96SM3 734 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 PABPC3Q9H361 631 aaKnown RBP18.5■□□□□ 0.55
HOMER3-208ENST00000595756 FAM204AQ9H8W3 233 aa18.5■□□□□ 0.55
HOMER3-208ENST00000595756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
HOMER3-208ENST00000595756 KIAA1522Q9P206 1035 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-208ENST00000595756 DMXL2Q8TDJ6 3036 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 A0A1W2PQC6 194 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 KCNU1A8MYU2 1149 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 F5H5T6 163 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 SH3BP5O60239 455 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 SIN3BO75182 1162 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 SLC2A3P11169 496 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 USP8P40818 1118 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 GRIA4P48058 902 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 UBASH3AP57075 661 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 PITX1P78337 314 aaPredicted RBP18.49■□□□□ 0.55
HOMER3-208ENST00000595756 FANCCQ00597 558 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 APBA1Q02410 837 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 SFSWAPQ12872 951 aaKnown RBP18.49■□□□□ 0.55
HOMER3-208ENST00000595756 SLC12A1Q13621 1099 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 EFHC1Q5JVL4 640 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 DPY19L2P1Q6NXN4 242 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 PPP1R13BQ96KQ4 1090 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 NOX5Q96PH1 765 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 STK33Q9BYT3 514 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 GAREM1Q9H706 876 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 ERVW-1Q9UQF0 538 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 SIK3Q9Y2K2 1263 aa18.49■□□□□ 0.55
HOMER3-208ENST00000595756 EDDM13A0A1B0GTR0 161 aa18.48■□□□□ 0.55
HOMER3-208ENST00000595756 TARSL2A2RTX5 802 aaKnown RBP18.48■□□□□ 0.55
HOMER3-208ENST00000595756 RNASEH1O60930 286 aaKnown RBP18.48■□□□□ 0.55
HOMER3-208ENST00000595756 CCR1P32246 355 aa18.48■□□□□ 0.55
HOMER3-208ENST00000595756 CDK17Q00537 523 aa18.48■□□□□ 0.55
HOMER3-208ENST00000595756 PTK2Q05397 1052 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms