RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 CCP110O43303 1012 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 TBX18O95935 607 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 CISD3P0C7P0 127 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 BRD2P25440 801 aaKnown RBP16.02■□□□□ 0.16
FOXA3-202ENST00000594297 IL12RB1P42701 662 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 TPMTP51580 245 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 KIF11P52732 1056 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 ORC1Q13415 861 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 PAQR9Q6ZVX9 377 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 ZNF571Q7Z3V5 609 aaPredicted RBP16.02■□□□□ 0.16
FOXA3-202ENST00000594297 C1orf216Q8TAB5 229 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 SMARCD1Q96GM5 515 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 TWNKQ96RR1 684 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 KLF16Q9BXK1 252 aaPredicted RBP16.02■□□□□ 0.16
FOXA3-202ENST00000594297 ITM2CQ9NQX7 267 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 KRT82Q9NSB4 513 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 PLK2Q9NYY3 685 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 HMGXB4Q9UGU5 601 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 NOCTQ9UK39 431 aaKnown RBP16.02■□□□□ 0.16
FOXA3-202ENST00000594297 PCDHGC3Q9UN70 934 aa16.02■□□□□ 0.16
FOXA3-202ENST00000594297 URB1O60287 2271 aaKnown RBP16.02■□□□□ 0.15
FOXA3-202ENST00000594297 MYH10P35580 1976 aa16.02■□□□□ 0.15
FOXA3-202ENST00000594297 SHROOM3Q8TF72 1996 aa16.02■□□□□ 0.15
FOXA3-202ENST00000594297 EIF3CLB5ME19 914 aaKnown RBP16.01■□□□□ 0.15
FOXA3-202ENST00000594297 NDUFA10O95299 355 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 MMEP08473 750 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 SETSIPP0DME0 302 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 GZMAP12544 262 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
FOXA3-202ENST00000594297 SLC18A3Q16572 532 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 GOLGA7BQ2TAP0 167 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 CCDC157Q569K6 752 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 E4F1Q66K89 784 aaPredicted RBP16.01■□□□□ 0.15
FOXA3-202ENST00000594297 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 SLC20A1Q8WUM9 679 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 SLC39A7Q92504 469 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 SNX19Q92543 992 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 EIF3CQ99613 913 aaKnown RBP16.01■□□□□ 0.15
FOXA3-202ENST00000594297 HNRNPABQ99729 332 aaKnown RBP16.01■□□□□ 0.15
FOXA3-202ENST00000594297 LHX5Q9H2C1 402 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 FAM49BQ9NUQ9 324 aa16.01■□□□□ 0.15
FOXA3-202ENST00000594297 LSM7Q9UK45 103 aaKnown RBP16.01■□□□□ 0.15
FOXA3-202ENST00000594297 SOWAHDA6NJG2 315 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 METTL12A8MUP2 240 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 M0QYV0 167 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 O00370 1275 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 AP1G2O75843 785 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 PLEKP08567 350 aaPredicted RBP16■□□□□ 0.15
FOXA3-202ENST00000594297 FAM200BP0CF97 657 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 ITPKBP27987 946 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 ADORA2BP29275 332 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 CSNK1EP49674 416 aaKnown RBP16■□□□□ 0.15
FOXA3-202ENST00000594297 BCAT1P54687 386 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 SMAD1Q15797 465 aaKnown RBP16■□□□□ 0.15
FOXA3-202ENST00000594297 PTPRNQ16849 979 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 CCDC122Q5T0U0 273 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 PPP1R26Q5T8A7 1209 aaPredicted RBP16■□□□□ 0.15
FOXA3-202ENST00000594297 DHRS13Q6UX07 377 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 FUKQ8N0W3 1084 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 PDCD7Q8N8D1 485 aaKnown RBP16■□□□□ 0.15
FOXA3-202ENST00000594297 C12orf29Q8N999 325 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 ANKRD52Q8NB46 1076 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 SLC2A14Q8TDB8 520 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 TRIM11Q96F44 468 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 SIPA1Q96FS4 1042 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 SYNCQ9H7C4 482 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 ACP6Q9NPH0 428 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 OSER1Q9NX31 292 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 TSPAN16Q9UKR8 245 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 SNX11Q9Y5W9 270 aa16■□□□□ 0.15
FOXA3-202ENST00000594297 MDM4O15151 490 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 ATXN7O15265 892 aaPredicted RBP15.99■□□□□ 0.15
FOXA3-202ENST00000594297 ZSCAN12O43309 604 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 RTN2O75298 545 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 BEST1O76090 585 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 IGLV3-19P01714 112 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 CCDC175P0C221 793 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 CCDC130P13994 396 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 OXTRP30559 389 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 MAGEA1P43355 309 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 COPAP53621 1224 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 CCZ1BP86790 482 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 CCZ1P86791 482 aaPredicted RBP15.99■□□□□ 0.15
FOXA3-202ENST00000594297 FMO1Q01740 532 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 BST2Q10589 180 aaKnown RBP15.99■□□□□ 0.15
FOXA3-202ENST00000594297 ENPP2Q13822 863 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 GEN1Q17RS7 908 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 KIF19Q2TAC6 998 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 ALKBH5Q6P6C2 394 aaKnown RBP15.99■□□□□ 0.15
FOXA3-202ENST00000594297 LAYNQ6UX15 382 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 Q6ZNB5 142 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 GPRIN1Q7Z2K8 1008 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 KIAA1328Q86T90 577 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 TMPRSS6Q8IU80 811 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 TMEM139Q8IV31 216 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 TFAP2BQ92481 460 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 ZNF830Q96NB3 372 aaPredicted RBP15.99■□□□□ 0.15
FOXA3-202ENST00000594297 SMOQ99835 787 aa15.99■□□□□ 0.15
FOXA3-202ENST00000594297 CYLDQ9NQC7 956 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms